Optimizing automated detection of high frequency oscillations using visual markings does not improve SOZ localization
Trisha MendozaiD, Casey L. Trevino, Daniel W. ShreyiD, Jack J. LiniD, Indranil Sen‐GuptaiD, Beth A. LopouriD
Abstract
ObjectiveHigh frequency oscillations (HFOs) are a biomarker of the seizure onset zone (SOZ) and can be visually or automatically detected. In theory, one can optimize an automated algorithms parameters to maximize SOZ localization accuracy; however, there is no consensus on whether or how this should be done. Therefore, we optimized an automated detector using visually identified HFOs and evaluated the impact on SOZ localization accuracy. MethodsWe detected HFOs in intracranial EEG from 20 patients with refractory epilepsy from two centers using (1) unoptimized automated detection, (2) visual identification, and (3) automated detection optimized to match visually detected HFOs. ResultsSOZ localization accuracy based on HFO rate was not significantly different between the three methods. Across patients, visually optimized detector settings varied, and no single set of settings produced universally accurate SOZ localization. Exploratory analysis suggests that, for many patients, detection settings exist that would improve SOZ localization. ConclusionsSOZ localization accuracy was similar for all three methods, was not improved by visually optimizing detector settings, and may benefit from patient-specific parameter optimization. SignificanceVisual HFO marking is laborious, and optimizing automated detection using visual markings does not improve localization accuracy. New patient-specific detector optimization methods are needed.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 2
- FWCI
- 0.59
- Field percentile
- top 33%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Amplitude of high frequency oscillations as a biomarker of the seizure onset zone
Krit Charupanit, Indranil Sen‐Gupta, … Beth A. Lopour·Clinical NeurophysiologyPeer-reviewed·Aug 25, 2020
- Using Automated Detection and Classification of Interictal HFOs to Improve the Identification of Epileptogenic Zones in Preparation for Epilepsy Surgery
S. Farahmand, T. Sobayo, D. Mogul·bioRxiv·Jun 23, 2019
- Fast oscillations >40Hz localize the epileptogenic zone: an electrical source imaging study using high-density electroencephalography
Tamir Avigdor, Chifaou Abdallah, … Birgit Frauscher·Clinical NeurophysiologyPeer-reviewed·Dec 22, 2020
- Beyond rates: Time-varying dynamics of high frequency oscillations as a biomarker of the seizure onset zone
Michael D. Nunez, Krit Charupanit, … Jack J. Lin·Journal of Neural EngineeringPeer-reviewed·Feb 1, 2022
- Detection of anomalous high frequency events in human intracranial EEG
Krit Charupanit, Indranil Sen‐Gupta, … Beth A. Lopour·Epilepsia OpenPeer-reviewed·May 4, 2020
- Detection of High-Frequency Oscillations from Intracranial EEG Data with Switching State Space Model
Zeyu Gu, Shihao Yang, … Feng Liu·Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)Peer-reviewed·Jul 15, 2024