bioRxivBiophysicsPreprint
Direct measurement of PET hydrolase interfacial kinetics reveals catalysis-independent surface remodelling
Kailey J PetziD, Arnaud BoudigouiD, Laura E. DicksoniD, Benoit Hugo LessardiD, Adam M. DamryiD
- Citations
- 0
Abstract
How PET hydrolases engage solid plastic has been inferred almost entirely from soluble analogs and surfactant-stabilised nanoparticle suspensions, and reported affinities span orders of magnitude. Here we measure it directly, depositing thin amorphous PET films onto gold surface plasmon resonance chips and following enzyme binding to authentic polymer in real time. Four PET hydrolases, LCC, LCC-ICCG, IsPETase-EHA and TfCut2, all bind with nanomolar apparent affinity and surface residence half-lives of tens of minutes. LCC-ICCG dissociates at 4.0 x 10^-1, within twofold of its kcat measured on authentic PET, indicating that turnover is limited by disengagement rather than by ester hydrolysis. During association, we observe non-monophasic responses for these enzymes, including, for several, a signal fall while enzyme is still flowing over the surface. This decline persists in a catalytically inactivated variant, is absent in control proteins and a structurally homologous non-plastic degrading cutinase, and cannot arise from movement of the bound enzyme alone. The polymer surface must therefore be altered non-catalytically by PET hydrolase binding. The process runs at different rates for different enzymes on an identical film, is suppressed by dilute Triton X-100, and is modulated biphasically by PET degradation products. Altogether, we conclude that enzymatic PET depolymerisation involves a catalysis-independent chain-mobilisation step that soluble assays cannot report.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comparative biochemistry of four polyester (PET) hydrolases
J. Arnling Baath, K. Borch, … P. Westh·bioRxiv·Nov 20, 2020
- From Bulk to Binding: Decoding the Entry of PET into Hydrolase Binding Pockets
Anna Jäckering, Frederike Göttsch, … Birgit Strodel·JACS AuPeer-reviewed·Sep 26, 2024
- Relationships of crystallinity and reaction rates for enzymatic degradation of poly (ethylene terephthalate), PET
S. Schubert, T. T. Bach, … P. Westh·bioRxiv·Nov 5, 2023
- Active Site Local Environment Allows Acidic and Basic Synergy in Enzymatic Ester Hydrolysis by PETase
Jeffrey Fan, Xueqi Chu, … Yang Ha·bioRxiv·Feb 5, 2026
- Supercharged binding modules can modulate engineered poly(ethylene terephthalate) hydrolase thermostability and functional persistence
Antonio DeChellis, Sumay Trivedi, … Shishir P. S. Chundawat·bioRxiv·May 27, 2026
- A Mechanistic Understanding of the Activity-Stability Trade-off in PETase
Shuang Chen, Ekram Akram, … Yufei Cao·Angewandte Chemie International EditionPeer-reviewed·Jul 23, 2025