bioRxivNeurosciencePreprint
Blood DDIT4 and TRIM13 transcript levels mark the early stages of Machado-Joseph disease
Ana F. FerreiraiD, Mafalda RaposoiD, Emily D. Shaw, João VasconcelosiD, Teresa Taylor KayiD, Conceição BettencourtiD, Maria Luiza Saraiva PereiraiD, Laura Bannach JardimiD, Maria do Carmo CostaiD, Manuela Caroline Ferreira LimaiD
- Citations
- 0
Abstract
Machado-Joseph disease (MJD) is a rare late-onset polyglutamine neurodegenerative disease caused by the expansion of a CAG repeat in the ATXN3 gene encoding the ataxin- 3 (ATXN3) protein. Several studies have identified changes in the abundance of select transcripts and proteins in blood samples of MJD mutation carriers. Here, we aimed to: 1) identify blood transcriptional changes that could be potential biomarkers of MJD from preclinical to symptomatic disease stages; 2) correlate levels of differentially expressed transcripts in blood of MJD carriers with demographic, genetics, and clinical features; and 3) evaluate whether the identified differential abundance of selected transcripts in blood of MJD subjects is preserved in post-mortem brains of MJD patients. Using real- time quantitative PCR, we observed consistent dysregulation of DDIT4, TRIM13 and P2RY13 transcript levels in blood samples of MJD subjects from different disease stages (from preclinical to symptomatic), and of patients from two cohorts with different backgrounds (Azores and Brazil). Importantly, combined blood DDIT4 and TRIM13 transcript levels display a very high accuracy to discriminate MJD carriers in preclinical stage, early-stage patients, and patients with more than five years of disease duration from respective controls (AUC=1.00, AUC=0.96, and AUC=0.90, respectively). Moreover, in the combined group of Azorean and Brazilian patients, blood levels of P2RY13 transcript correlate with age at onset, and abundance of DDIT4 and TRIM13 transcripts correlate with the CAG repeat size of the expanded ATXN3 allele. In the subgroup of early-stage Azorean patients, blood levels of TRIM13 transcripts correlate with age at disease onset. Interestingly, abundance of DDIT4, TRIM13 and P2RY13 proteins is also altered in brains of MJD patients. In summary, this work shows that blood DDIT4 and TRIM13 transcript levels are potentially blood-based biomarkers of MJD of special usefulness in marking preclinical and early stages of the disease, and points for common dysregulated processes involving DDIT4, TRIM13 and P2RY13 in the blood and the brain of MJD subjects.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Tissue-specific vulnerability to apoptosis in Machado-Joseph disease
Ana F. Ferreira, Mafalda Raposo, … Manuela Caroline Ferreira Lima·CellsPeer-reviewed·May 17, 2023
- Allele-specific expression of ATXN3 in blood samples of Machado-Joseph disease expansion carriers.
Ana Rosa Vieira Melo, Sandra Martins, … Mafalda Raposo·medRxiv·Jan 29, 2026
- Genome-wide association study identifies genetic factors that modify age at onset in Machado-Joseph disease
Fulya Akçimen, Sandra Martins, … Guy Armand Rouleau·AgingPeer-reviewed·Mar 23, 2020
- Circadian Rhythms are Disrupted in Patients and Preclinical Models of Machado-Joseph Disease
Rodrigo F.N. Ribeiro, Dina Pereira, … Cláudia Cavadas·BrainPeer-reviewed·May 27, 2025
- Mitochondrial dysfunction in Machado Joseph disease: insights from a multi-model system
Ignacio Simo, Katherine J. Robinson, … Angela S. Laird·bioRxiv·May 1, 2025
- Gut transit and gut microbiome changes occur prior to the onset of motor impairment in a mouse model of Machado-Joseph disease
Vasilisa Zvyagina, Andrea Kuriakose, … Angela S. Laird·Neurobiology of DiseasePeer-reviewed·Sep 27, 2025