PLoS ONECancer BiologyPeer-reviewed journal article
β2-integrins as biomarkers in urothelial cancer
Marc Llort AsensiD, Imran KhaniD, Susanna Carola FagerholmiD
Abstract
{beta}2-integrins are a family of adhesion proteins expressed in immune cells that play multiple roles in anti-tumor immunity. {beta}2-integrins regulate tumor infiltration of anti-tumorigenic immune cells such as cytotoxic CD8+ T cells and NK cells. However, they also regulate the activity of myeloid cells, such as macrophages, which can have both anti- and pro-tumorigenic properties. The role of {beta}2-integrins in urothelial cancer remains poorly understood. Here, we have investigated the role of different {beta}2-integrins, and their cytoplasmic regulators, in urothelial cancer, by utilizing RNA expression data. We found that ITGAL (encoding for CD11a) and FERMT3 (encoding for the integrin regulator kindlin-3) have a positive correlation with patient survival. EcoTyper analysis revealed increased infiltration of CD8+ T cells and NK cells in ITGAL high samples, but ITGAL or FERMT3 expression did not correlate with response to immunotherapy. In contrast, ITGAM and ITGAX (which encode for myeloid markers CD11b and CD11c) and FLNA (encoding for the integrin regulator filamin A) correlated with poor survival and reduced responsiveness to immunotherapy and critically regulate the tumor myeloid immune landscape (M1/M2 macrophages, cDC1 dendritic cells). Therefore, different {beta}2-integrins may be used as biomarkers to differentiate urothelial cancer patients with different immune landscapes, responding differently to therapy.
- organism: human
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- approach: statistical model
- Citations
- 0
- FWCI
- 0.00
- Field percentile
- 35th percentile
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Tumor B cell infiltration in platinum-treated advanced urothelial carcinoma
Konrad Stawiski, Júlia Perera‐Bel, … Joaquim Bellmunt B·bioRxiv·Feb 27, 2025
- Chorionic Gonadotropin Beta 7 is a marker of immune evasion in cancer
Siegen A. McKellar, Jose Mario Bello Pineda, … Robert K. Bradley·bioRxiv·May 28, 2025
- Antibody Targeting of B7-H4 Enhances the Immune Response in Urothelial Carcinoma
J. R. Podojil, A. P. Glaser, … J. J. Meeks·bioRxiv·Aug 10, 2019
- Landscape of tumor-infiltrating immune cells in human immunogenic cancers: B cells are inversely associated with CD8T cells, but positively correlated with Treg cells
Y. K. Chae, W. Bae, … F. J. Giles·bioRxiv·May 17, 2019
- SH2D2A is an indicator of favourable prognosis in bladder cancer and is enriched in Treg cells
Brian C. Gilmour, Johan Georg Visser, … Anne Spurkland·bioRxiv·Jan 13, 2025
- Accounting for B cell behaviour and sampling bias yields a superior predictor of anti-PD-L1 response in bladder cancer
I. A. Dyugay, D. K. Lukyanov, … D. M. Chudakov·bioRxiv·Mar 4, 2021