Applied and Environmental MicrobiologyMicrobiologyPeer-reviewed journal article
Cyanobacteria newly isolated from marine volcanic seeps display rapid sinking and robust, high density growth
M. G. Schubert, T.-C. Tang, I. M. Goodchild-Michelman, K. A. Ryon, J. R. Henriksen, T. Chavkin, Y. Wu, T. P. Miettinen, S. Van Wychen, L. Dahlin, D. Spatafora, G. Turco, M. Guarnieri, S. R. Manalis, J. Kowitz, R. Dhir, P. Quatrini, C. E. Mason, G. M. Church, M. Milazzo, B. T. Tierney
Abstract
Cyanobacteria are photosynthetic organisms that play important roles in carbon cycling as well as promising bioproduction chassis. Here, we isolate two novel cyanobacteria, UTEX 3221 and UTEX 3222, from a unique marine environment with naturally elevated CO2. We describe complete genome sequences for both isolates and, focusing on UTEX 3222 due to its planktonic growth in liquid, characterize biotechnologically-relevant growth and biomass characteristics. UTEX 3222 outpaces other fast-growing model strains on solid medium. It can double every 2.35 hours in a liquid medium and grows to high density (>31g/L biomass dry weight) in batch culture, nearly double that of Synechococcus sp. PCC 11901, whose high-density growth was recently reported. In addition, UTEX 3222 sinks readily, settling more quickly than other fast-growing strains, suggesting improved de-watering of UTEX 3222 biomass. This settling behavior can be explained in part by larger cell volume. These traits may make UTEX 3222 a compelling choice for photosynthetic bioproduction from CO2. Overall, we find that bio-prospecting in environments with naturally elevated CO2 may uncover novel CO2-metabolizing organisms with unique characteristics.
- assay: DNA methylation
- assay: whole-genome sequencing
- research focus: cell type annotation
- research focus: clustering
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: experimental assay
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