Topic · Epidemiology · Medicine
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
63 papers
Richard Newton, Lorenz Wernisch
The paper compares Bayesian modeling and machine learning for serotype classification of Streptococcus pneumoniae using genomic data, finding machine learning outperforms the Bayesian model with enhanced training data.
BMC Genomics · Aug 11, 2017Peer-reviewedGenomics
John A. Lees, Nicholas J. Croucher, David Goldblatt, François Henry Nosten, Julian Parkhill, Claudia L. Turner, Paul Turner, Stephen D. Bentley
This paper identifies genomic variation associated with pneumococcal carriage duration using longitudinal data and genome-wide association studies.
eLife · Jul 25, 2017Peer-reviewedGenomics
Andries J. van Tonder, James E. Bray, Keith A. Jolley, Sigríður Júlía Quirk, Gunnsteinn Haraldsson, Martin C. J. Maiden, Stephen D. Bentley, Ásgeir Haraldsson, Helga Erlendsdóttir, Karl Gustaf Kristinsson, Angela B. Brueggemann
The paper analyzes genome sequences of pneumococci from different populations to assess core and pan-genome variability, finding significant differences between Maela isolates and others.
bioRxiv · May 6, 2017 · PreprintGenomics