Topic · Plant Science · Agricultural and Biological Sciences
Weed Control and Herbicide Applications
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
28 papers
Distribution of target-site resistance mechanisms to nicosulfuron and glyphosate in Amaranthus palmeri accessions from two different regions of Turkiye
Filiz Erbaş, Sara Álvarez‐Rodríguez, Michael Ozolins, Eric L. Patterson
The paper examines target-site resistance mechanisms to nicosulfuron and glyphosate in Amaranthus palmeri from two regions in Turkiye, finding regional differences in mutation prevalence and gene copy number.
bioRxiv · Sep 22, 2026 · PreprintPlant Biology
Tolerance to herbicide drift in "weedy" species is context-dependent and driven by early vegetative growth
Veronica Iriart, Tia‐Lynn Ashman, Matthew R. Armstrong, Sara M. Colom, Toshiro Newsum, Anah Soble, Regina S. Baucom
This study examines how sublethal herbicide drift affects fitness of weed species across different agro-ecological contexts, finding context-dependent tolerance and links to developmental traits.
bioRxiv · Sep 16, 2026 · PreprintEcology
DIFFERENTIAL PHOTOSYNTHETIC RESPONSES TO GLUFOSINATE AMMONIUM IN TWO GRASS WEEDS: Lolium multiflorum AND Echinochloa crus-galli.
Ornella Sabatini, Juana Villalba, Sebastián Simondi, María J. Sáinz, Gastón Quero
This study compares the sensitivity of two grass weeds to glufosinate ammonium, finding that barnyardgrass (C4) shows greater sensitivity than ryegrass (C3) due to differences in photosynthetic metabolism and oxidative stress response.
bioRxiv · Sep 1, 2026 · PreprintPlant Biology
Fendioxypyracil Exhibits Potent Inhibition of PPO-Resistant Mutant Enzymes and Robust Activity Against PPO-Resistant Amaranthus
Aimone Porri, Jens Lerchl, Ingo Meiners, Liliana Parra Rapado, Scott Asher, Sarah Stilgenbauer, Jason Keith Norsworthy, Susee Sudhakar
This study evaluates fendioxypyracil's efficacy against PPO-resistant Amaranthus mutants and finds it maintains low IC50 values and strong weed control in field trials.
bioRxiv · Aug 24, 2026 · PreprintMolecular Biology
Polygenic adaptation from standing variation underlies rapid evolution under anthropogenic selection in an agricultural weed
Célia Neto, Augustin Baussay, Paul Neve
The paper analyzes herbicide resistance in blackgrass, showing TSR mutations arose recently while NTSR evolved from pre-existing genetic variation.
bioRxiv · Aug 22, 2026 · PreprintEvolutionary Biology
Investigating the mechanism of resistance to indaziflam in Poa annua
Mohit Mahey, Michael Ozolins, Joshua W. A. Miranda, Marcelo Luvizotto Moretti, James T. Brosnan, Peter Knut Lundquist, Eric L. Patterson
This study identifies a novel SNP in coatomer subunit gamma and a CYP81A91_A gene as potential contributors to indaziflam resistance in Poa annua through RNA-seq and variant calling.
bioRxiv · Jul 19, 2026 · PreprintPlant Biology
Resistance to protoporphyrinogen oxidase inhibitor herbicides in giant ragweed (Ambrosia trifida) is associated with a novel R98Q target-site mutation in PPO2
Cristiana Bernardi Rankrape, Isabel Schlegel Werle, Eduardo Lago, Alexander J. Lopez, Patrick J. Tranel, Karla L. Gage
This study identifies a novel R98Q mutation in PPO2 as the target-site resistance mechanism for PPO-inhibitor herbicides in giant ragweed population VRC, while TMS shows resistance without target-site alteration.
bioRxiv · Jul 17, 2026 · PreprintPlant Biology
Changes in cuticle composition co-regulate drought and herbicide resistance in horseweed (Erigeron canadensis)
Michael Ozolins, Ahmet Tansel Serim, Mohit Mahey, Sara Álvarez‐Rodríguez, Eric L. Patterson
This study shows drought stress alters cuticle composition and gene expression in horseweed, reducing glyphosate absorption and increasing herbicide resistance.
bioRxiv · Jun 21, 2026 · PreprintPhysiology
Biochemical Characterization of Fatty Acid Thioesterase Target Site Mutants and their Implication on Herbicide Resistance
Paula Wagner, Jens Lerchl, Michael Betz, Aimone Porri
This study evaluates the potential for target-site resistance to the herbicide cinmethylin by analyzing amino acid substitutions in FAT A and FAT B, finding limited practical risk of resistance evolution.
bioRxiv · Jun 14, 2026 · PreprintBiochemistry
Phylogenetic signal in herbicide resistance evolvability, and the use of phylogenies to predict herbicide resistance risk
The paper shows phylogenetic signal in herbicide resistance evolvability and demonstrates machine learning models can predict resistance risk using phylogenetic distances.
bioRxiv · Apr 24, 2026 · PreprintEvolutionary Biology
Novel Protoporphyrinogen oxidase 1 mutations endow resistance to PPO-inhibiting herbicides in Bassia scoparia
Aimone Porri, Quincy D. Law, Charles M. Geddes, Joseph T. Ikley, Samuel D. Willingham, Philipp Johnen, Ingo Meiners, Sama Al-Sammarraie, Kim Crommar, Pieter B. F. Ouwerkerk, Michael Betz, Brian M. Jenks, Heike Heiser, Fabienne Baumann, Frank Brändle, Jens Lerchl
This study identifies PPO1 mutations in Bassia scoparia that confer resistance to PPO-inhibiting herbicides, with fomesafen remaining effective against resistant biotypes.
bioRxiv · Jan 15, 2026 · PreprintBiochemistry
Insights into the molecular mechanism and management of resistant Echinochloa crus-galli biotypes from the Philippines to acetolactate synthase inhibitor bispyribac-sodium
Niña Gracel Dimaano, John Kenneth Polo, Euzane Joy Macarilay, Christianne Lei Golena, Micah Rinoa Testor, Jessa Jean Buen, Clare Hazel R. Tabernilla, Analiza Henedina Ramirez, Mary Joy M. Abit, Satoshi Iwakami
This study identifies resistance mechanisms in Echinochloa crus-galli biotypes from the Philippines to the ALS inhibitor bispyribac-sodium, revealing genetic and metabolic factors contributing to resistance.
bioRxiv · Oct 3, 2025 · PreprintPlant Biology
Promiscuous cytochrome P450s confer metabolic resistance to synthetic auxin herbicides in the weedy grass Echinochloa phyllopogon
Pattarasuda Chayapakdee, Kowit Hengphasatporn, Takuya Yamaguchi, Niña Gracel Dimaano, Yasuteru Shigeta, Yukari Sunohara, Hiroshi Matsumoto, Satoshi Iwakami
This study identifies promiscuous CYP81A P450 enzymes in Echinochloa phyllopogon that confer resistance to synthetic auxin herbicides through metabolic detoxification.
bioRxiv · Jul 29, 2025 · PreprintPlant Biology
Integrated multi-omics analysis reveals divergent molecular responses in Palmer amaranth (Amaranthus palmeri) biotypes susceptible and resistant to glyphosate
Pawanjit Kaur Sandhu, Rohit Kumar, Vijay K. Nandula, Nishanth Tharayil
This study compares molecular responses in glyphosate-resistant and susceptible Palmer amaranth biotypes using multi-omics analysis, revealing distinct metabolic and transcriptional changes.
bioRxiv · Jul 20, 2025 · PreprintPlant Biology
Metabolomic profiling of glyphosate resistance evolution in green alga Chlamydomonas reinhardtii
Erika M. Hansson, Heather J. Walker, Dylan Z. Childs, Andrew P. Beckerman
This study uses metabolomic profiling to analyze glyphosate resistance evolution in Chlamydomonas reinhardtii, revealing metabolic changes and fitness trade-offs associated with resistance.
bioRxiv · Jul 10, 2025 · PreprintEvolutionary Biology
Wheat - black-grass competition is a non-zero-sum game influenced by root growth
Jed Clark, Lynn V. Tatnell, Tom Bennett
This study investigates wheat-black-grass competition, finding that black-grass's competitive advantage stems from vigorous root growth during winter, and that crop competitiveness is linked to root growth and not a zero-sum game.
bioRxiv · Jun 2, 2025 · PreprintPlant Biology
Off target: herbicides applied in cereal fields exclude non-competitive species, while replacing them by competitive weeds.
Ségolène Humann‐Guilleminot, Vincent Bretagnolle, Sabrina Gaba
This study shows herbicide quantity negatively impacts weed abundance and diversity more than application frequency, while fungicide frequency has indirect long-term effects on weed suppression.
bioRxiv · May 21, 2025 · PreprintEcology
Subgenome dominance of ALS target site mutations impacts herbicide resistance in allohexaploid Echinochloa crus-galli
Luan Cutti, Guilherme Menegol Turra, Filipi Mesquita Machado, Estéfani Sulzbach, Paula Sinigaglia Angonese, Catarine Markus, Todd Adam Gaines, Aldo Merotto
This study examines how subgenome-specific ALS mutations and expression levels affect herbicide resistance in allohexaploid Echinochloa crus-galli.
bioRxiv · Feb 20, 2025 · PreprintGenetics
Extrachromosomal DNA-mediated glutamine synthetase 2 (GS2) amplification enables glufosinate resistance in Amaranthus palmeri
Matheus M. Noguera, Patrice S. Albert, Christopher A. Saski, James A. Birchler, Aimone Porri, Ingo Meiners, Jens Lerchl, Nilda R. Burgos
The paper investigates how extrachromosomal DNA (eccDNA) contributes to glufosinate resistance in Palmer amaranth by amplifying the GS2 gene.
bioRxiv · Dec 13, 2024 · PreprintGenomics
A Novel Genomic Rearrangement in the Amaranthus palmeri Extrachromosomal Circular DNA Provides Dual Herbicide Resistance to Glyphosate and Glufosinate
Pâmela Carvalho-Moore, Ednaldo Alexandre Borgato, Luan Cutti, Aimone Porri, Ingo Meiners, Jens Lerchl, Jason Keith Norsworthy, Eric L. Patterson
The paper identifies a novel extrachromosomal circular DNA in Amaranthus palmeri that confers resistance to both glyphosate and glufosinate by co-duplicating resistance genes.
bioRxiv · Oct 8, 2024 · PreprintGenomics
Investigating the links between trifluralin persistence in Western Australian soils and trifluralin resistance in resident annual ryegrass (Lolium rigidum) populations
Danica E. Goggin, Tim Boyes, Roberto Busi, Ken C. Flower
The paper examines the relationship between trifluralin dissipation in Western Australian soils and resistance in annual ryegrass, finding no direct correlation but suggesting soil properties may influence resistance development.
bioRxiv · Jul 31, 2024 · PreprintPlant Biology
Assessing the probability and time of weed control failure due to herbicide resistance evolution
Dana Lauenroth, Chaitanya S. Gokhale
This study models herbicide resistance evolution in weeds, finding that small fitness costs and self-pollination reduce adaptation from standing genetic variation, and seed banks enhance adaptive potential.
bioRxiv · Apr 26, 2024 · PreprintEvolutionary Biology
The blackgrass genome reveals patterns of divergent evolution of non-target site resistance to herbicides.
Lichun Cai, David Comont, Dana R. MacGregor, Claudia Lowe, Roland Beffa, Christopher A. Saski, Paul Neve
The paper analyzes the blackgrass genome to understand the genetic basis of non-target site herbicide resistance and its evolutionary mechanisms.
bioRxiv · Dec 14, 2021 · PreprintGenomics
Virus-mediated transient expression techniques enable genetic modification of Alopecurus myosuroides
Macarena Mellado-Sánchez, Faye McDiarmid, Victor Cardoso, K. Kanyuka, Dana R. MacGregor
Virus-mediated transient expression techniques create loss- and gain-of-function mutations in black-grass and show causation between specific genotypes and measurable changes in herbicide resistance.
bioRxiv · Jan 28, 2020 · PreprintGenetics
Fenoxaprop-p-ethyl susceptibility and mutation point detection of acetyl-coa carboxylase (ACCase) in different wild oat (Avena fatua L.) populations from China
Junjie Liu, Liuyang Lu, Baizhong Zhang, Xiling Chen
The paper investigates fenoxaprop-p-ethyl resistance in wild oat populations by analyzing ACCase activity, gene expression, and mutation sites.
bioRxiv · Feb 13, 2019 · PreprintMolecular Biology