Topic · Global and Planetary Change · Environmental Science
Marine Bivalve and Aquaculture Studies
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
11 papers
Native Olympia Oysters in San Francisco Bay: Microbiome and Antimicrobial Resistance Derived Insights Into Restoration
Nishta Mukundan, Sanjiev Nand, Anand Archana
The paper uses shotgun metagenomics to analyze microbiomes and antimicrobial resistance in San Francisco Bay oysters, finding that matrix type, not location, structures microbiomes and biofilms are AMR hotspots.
bioRxiv · Oct 30, 2025 · PreprintGenomics
Shedding light on day-night habitat use of oyster reefs by fish
Diego L Gloria, Michael Sievers, César Herrera, Rod M. Connolly
This study investigates day-night habitat use of fish on oyster reefs and unstructured habitats, finding greater diversity during the day and diel shifts in species composition.
bioRxiv · Oct 2, 2025 · PreprintEcology
Prevalence of hemic neoplasia in cockles and co-habiting bivalve species in the western coast of France and the southern coast of Portugal.
Alicia L. Bruzos, Angèle Moulin, Géo Bujard, Anthony Sturbois, Alejandro Viña-Feás, Ana Amaral, Camille Détrée
This study examines the prevalence of hemic neoplasia in cockles and co-habiting bivalve species in France and Portugal, finding species-specific transmission and no size differences between infected and uninfected cockles.
bioRxiv · Jul 30, 2025 · PreprintCancer Biology
Optimizing Oyster Breeding with Machine Learning and BigData for Superior Quality
Prabhudarshi Nayak, Ritunsa Mishra, Rohan Swain, Deepak Sahoo
This paper uses machine learning and multi-omics data to optimize oyster breeding, reducing winter mortality and improving growth rates through marker-assisted selection and predictive algorithms.
bioRxiv · May 16, 2025 · PreprintBioinformatics
Characterisation of Marteilia cocosarum in the Wash Estuary, UK, linked to mass mortalities of cockles (Cerastoderma edule), and its relationship to closely related species
Anna M. Tidy, Ron Jessop, Georgia M. Ward, Matthew J. Green, Kelly S. Bateman, David Bass, Jasmine E. Hunt, Stuart H. Ross, Chantelle Hooper
The paper investigates Marteilia cocosarum infection in cockles in The Wash Estuary, UK, linking it to mass mortalities and identifying genetic differences from a Welsh genotype.
bioRxiv · Feb 13, 2025 · PreprintMolecular Biology
Cryopreservation of Juvenile Mytilus galloprovincialis: Safeguarding Mollusk Biodiversity and Aquaculture
Alba Lago, Jesus Souza Troncoso, Estefanía Paredes
This paper develops a cryopreservation protocol for juvenile Mytilus galloprovincialis, enabling the preservation of complex larval stages and juveniles, with implications for biodiversity conservation and aquaculture sustainability.
bioRxiv · Jan 8, 2025 · PreprintZoology
A novel method for in vivo assessment of soft tissue weight in bivalves
Shiyun Duan, Yunlong Gao, Xiaoli Hu, Xiaoshen Yin
The paper develops a novel method to estimate soft tissue weight in bivalves using shell surface area, outperforming traditional models in accuracy and bias reduction.
bioRxiv · Dec 25, 2024 · PreprintGenetics
Planktonic oyster larvae optimize settlement decisions in complex sensory landscapes
Sarah Schmidlin, Yliam Treherne, Jan Mees, Pascal István Hablützel
This study examines how Pacific oyster larvae make settlement decisions in response to multiple chemical cues, showing additive effects of attractants and suppression of repellents when substrates are present.
bioRxiv · Nov 28, 2024 · PreprintEcology
Transcriptome characterization of the common cockle (Cerastoderma edule) after exposure to a Marteilia cochillia outbreak
Belén G. Pardo, Carlos Fernández, M. Pampín, Andrés Blanco, David Iglesias, Asunción Cao, Marı́a J. Carballal, António Villalba, Paulino Martı́nez
The paper characterizes the transcriptome of the common cockle after exposure to Marteilia cochillia, identifying differentially expressed genes and their molecular functions related to immune response.
bioRxiv · Oct 18, 2022 · PreprintGenomics
Genetic analysis identifies the Ostrea stentina/aupouria/equestris oyster species complex in Hawai'i, and resolves its lineage as the western Pacific O. equestris
Jolene T. Sutton, Jared H.K. Nishimoto, Jeremy Schrader, Keinan Agonias, Nicole Antonio, Brandi Bautista, Riley Cabarloc, Maata Fakasieiki, Noreen Aura Mae Gonong, Torey Ramangmou, Lavin Uehara, Jade Wong, Daniel P. Wilkie, David Littrell, Marni Rem-McGeachy, , Maria C. Haws
The paper uses genetic sequencing to identify oyster species in Hawai'i, finding most unknown samples belong to the Ostrea stentina/aupouria/equestris complex and confirming the presence of O. equestris in the region.
bioRxiv · Mar 22, 2020 · PreprintGenetics