Genetics and Plant Breeding

Identification of salt tolerant genotypes in wheat using stress tolerance indices

This study identifies salt-tolerant wheat genotypes using stress tolerance indices under normal and salinity stress conditions.

INCORPORATING A DYNAMIC GENE-BASED PROCESS MODULE INTO A CROP SIMULATION MODEL

This paper integrates a gene-based module into a crop simulation model to simulate time-to-flowering in common bean, showing improved accuracy compared to traditional genotype-specific parameter approaches.

New genotypic adaptability and stability analyses using Legendre polynomials and genotype-ideotype distances

The paper introduces a new methodology for analyzing genotypic adaptability and stability using Legendre polynomials and genotype-ideotype distances, showing improved accuracy in predicting cultivar performance across environments.

Assessment of heterotic potential and combining ability of immortal restorer lines derived from an elite rice hybrid, KRH-2, for the development of superior rice hybrids

Can crop phenology and plant height be channelized to improvise wheat productivity in diverse production environments?

This study shows that non-grain traits like plant height and flowering time can improve wheat productivity and grain weight in diverse environments by selecting varieties with optimal growth characteristics.

Quantitative genetic architecture of adaptive phenology traits in the deciduous tree, Populus trichocarpa (Torr. & Gray).

This study estimates the genetic basis of spring and autumn phenology in Populus trichocarpa to assess its capacity for climate adaptation.

Understanding the genetics of important traits in quality protein maize (Zea mays L.) by Line by Tester analysis

This study uses Line by Tester analysis to identify genetic factors influencing agronomical and biochemical traits in quality protein maize.

Self-organized map: the new aproach for study of genetic divergence in kale

The paper uses self-organized maps (SOM) to study genetic divergence in kale, finding 100% correct classification of genotypes using Anderson's discriminant analysis.

Multivariate Analysis Of Potato Genotypes For Genetic Diversity

The paper uses multivariate analysis to assess genetic diversity in potato genotypes based on qualitative and quantitative traits, identifying significant correlations and variability among traits.

metan: an R package for multi-environment trial analysis

The paper introduces the metan R package for analyzing multi-environment trial data in plant breeding, providing tools for data manipulation, modeling, and visualization.

Image-based Phenotyping and Genetic Analysis of Potato Skin Set and Color

The paper uses image analysis to quantify potato skin color and set, finding high heritability and environmental correlations, and highlights collinearity among color traits.

Modelling spatial variation in agricultural field trials with INLA

This paper compares spatial models for agricultural field trials using INLA, showing AR1⊗AR1 and SPDE models provide best predictive performance with or without genomic data.

Integrating molecular markers and environmental covariates to interpret genotype by environment interaction in rice (Oryza sativa L.) grown in temperate areas

The paper predicts rice yield and quality traits using molecular markers and environmental covariates, finding that PLS models outperform reaction norm models in predicting future performance.

AMMISOFT for AMMI Analysis with Best Practices

The paper introduces AMMISOFT, an open-source tool for AMMI analysis, to streamline the protocol for genotype-by-environment interaction studies in crop improvement.

Genetic Variability and Correlation Coefficients of Major Traits in Early Maturing Rice under Rainfed Lowland Environments of Nepal

Deciphering hybrid larch reaction norms using random regression

This study uses random regression to analyze reaction norms of hybrid larch traits in response to water availability, finding hybrids to be more plastic than parental species.

Genetic control of transition from juvenile to mature wood with respect to microfibril angle (MFA) in Norway spruce (Picea abies) and lodgepole pine (Pinus contorta)

This study evaluates genetic control of microfibril angle transition from juvenile to mature wood in Norway spruce and lodgepole pine using heritability estimates and regression functions.

Integrating genotype and weather variables for soybean yield prediction using deep learning

This paper uses deep learning to predict soybean yield by integrating genotype and weather data from historical trials.

Genotype-by-Environment Interactions Affecting Heterosis in Maize

This study examines how genotype-by-environment interactions affect heterosis in maize hybrids and their inbred parents across 16 environments and 25 traits.

Dissecting the genetic architecture of shoot growth in carrot (Daucus carota L.) using a diallel mating design

This paper uses a diallel mating design and Bayesian analysis to study the genetic basis of shoot growth in carrot, finding that non-additive effects significantly influence early growth traits.