Author

A. Alberdi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Organism:mouse· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

M. T. P. Gilbert· 3 shared O. Aizpurua· 2 shared A. D. Foote· 1 shared A. Koziol· 1 shared A. Vlaschenko· 1 shared C. Ibanez· 1 shared D. Russo· 1 shared E. Izagirre· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersEcology

M. T. P. Gilbert

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Author profile →

4 papers

Recent·Most cited

A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics

R. Eisenhofer, J. Nesme, L. Santos-Bay, A. Koziol, S. J. Sorensen, A. Alberdi, O. Aizpurua

The paper compares short-read, HiFi long-read, and hybrid sequencing strategies for genome-resolved metagenomics, finding each excels in different metrics like assembly quality, bin refinement, and mapping rate.

bioRxiv · Oct 4, 2023Microbiology

hilldiv: an R package for the integral analysis of diversity based on Hill numbers

A. Alberdi, M. T. P. Gilbert

The paper introduces an R package called hilldiv for analyzing diversity using Hill numbers, with functions for measuring, plotting, comparing, and partitioning diversity from OTU tables and phylogenetic trees.

bioRxiv · Oct 1, 2019 · PreprintEcology

Diet diversification shapes broad-scale distribution patterns in European bats

A. Alberdi, O. Razgour, O. Aizpurua, R. Novella-Fernandez, J. Aihartza, I. Budinski, I. Garin, C. Ibanez, E. Izagirre, H. Rebelo, D. Russo, A. Vlaschenko, V. Zhelyazkova, V. Zrncic, M. T. P. Gilbert

This study links dietary diversification to broad-scale bat distribution patterns by analyzing trophic and spatial niche breadths across seven European bat species.

bioRxiv · Jul 17, 2019 · PreprintEcology

Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin

R. Hooper, J. Brealey, T. van der Valk, A. Alberdi, J. W. Durban, H. Fearnbach, K. M. Robertson, R. W. Baird, M. B. Hanson, P. Wade, M. T. P. Gilbert, P. A. Morin, J. B. W. Wolf, A. D. Foote, K. Guschanski

The paper uses host shotgun sequencing data to characterize the skin microbiome of killer whales and shows how social and geographic factors influence microbial community composition.

bioRxiv · Jul 26, 2018Evolutionary Biology