Author

A. C. Marques

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

A. Janiszewski· 1 shared A. R. Bassett· 1 shared A. Saitta· 1 shared A. Willig· 1 shared C. Chong· 1 shared C. Grimm· 1 shared C. Pozzorini· 1 shared C. R. Goding· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

A. Janiszewski

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2 papers

Recent·Most cited

A deep learning approach for improved detection of homologous recombination deficiency from shallow genomic profiles

G. Andre, T. Coletta, C. Pozzorini, A. C. Marques, J. Bieler, R. Kempfer, C. Chong, A. Saitta, E. Smith, M. Macheret, A. Janiszewski, X. Bonilla, J. Bonet, H. Santos-Silva, M. Postl, , Z. Xu

This paper introduces a deep learning model to detect homologous recombination deficiency from shallow whole genome sequencing data, achieving high accuracy comparable to deeper sequencing methods.

bioRxiv · Jul 6, 2022 · PreprintCancer Biology

The MITF-SOX10 regulated long non-coding RNA DIRC3 is a melanoma tumour suppressor

E. A. Coe, J. Y. Tan, M. Shapiro, P. Louphrasitthiphol, A. R. Bassett, A. C. Marques, C. R. Goding, K. W. Vance

This study identifies DIRC3, a MITF-SOX10 regulated lncRNA, as a tumour suppressor in melanoma that promotes survival by modulating chromatin structure and IGFBP5 expression.

bioRxiv · Mar 27, 2019Cancer Biology