Author

A. de Bernardi Schneider

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Evolutionary Biology· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:phylogenetics / evolution· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

M. T. Wolfinger· 2 shared A. N. O'Toole· 1 shared A. Rambaut· 1 shared A. S. Hinrichs· 1 shared C. Roemer· 1 shared C. Ruis· 1 shared D. A. Janies· 1 shared D. Jacob Machado· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersEvolutionary Biology

M. T. Wolfinger

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintFeb 3, 2023

Automated Agnostic Designation of Pathogen Lineages

J. McBroome, A. de Bernardi Schneider, C. Roemer…·R. Corbett-Detig

The paper introduces an automated method for pathogen lineage designation using phylogenetic trees, offering a consistent alternative to manual curation.

DOI 10.1101/2023.02.03.527052

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

Evolutionary BiologybioRxivJan 17, 2021

Dynamic molecular epidemiology reveals lineage-associated single-nucleotide variants that alter RNA structure in Chikungunya virus

T. Spicher, M. Delitz, A. de Bernardi Schneider, M. T. Wolfinger

The paper analyzes CHIKV genomes to identify lineage-associated single-nucleotide variants that alter RNA structure stability and folding.

DOI 10.3390/genes12020239

viruswhole-genome sequencing

𝕏 PostBluesky

Evolutionary BiologybioRxivJun 18, 2019

Enhanced genome annotation strategy provides novel insights on the phylogeny of Flaviviridae

A. de Bernardi Schneider, D. Jacob Machado, D. A. Janies

The paper develops a genome annotation pipeline for Flaviviridae, improving phylogenetic analysis and reclassifying divergent viruses.

DOI 10.3390/v12080892

whole-genome sequencingdeep learning

𝕏 PostBluesky