Author

A. Y. Afanasyev

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A. V. Onufriev· 3 shared I. S. Tolokh· 1 shared I. V. Sharakhov· 1 shared Y. Kim· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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3 shared papersBiophysics

A. V. Onufriev

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3 papers

Recent·Most cited

Multi-plateau force-extension curves of long double-stranded DNA

A. Y. Afanasyev, A. V. Onufriev

The paper predicts that long composite double-stranded DNA with segments of different plateau forces will show multiple plateau regions in force-extension curves under physiological conditions.

bioRxiv · Mar 12, 2023 · PreprintBiophysics

Stretching of long double-stranded DNA and RNA described by the same model.

A. Y. Afanasyev, A. V. Onufriev

The paper introduces a bead-spring model that accurately describes force-extension curves of long double-stranded DNA and RNA, including supercoiled DNA, and provides an algorithm to determine its parameters.

bioRxiv · Mar 9, 2022Biophysics

The probability of chromatin to be at the nuclear lamina has no systematic effect on its transcription level in fruit fly.

A. Y. Afanasyev, Y. Kim, I. S. Tolokh, I. V. Sharakhov, A. V. Onufriev

The paper examines the relationship between TAD positioning at the nuclear lamina and gene expression in Drosophila, finding no systematic effect on transcription levels.

bioRxiv · Feb 17, 2022Cell Biology