Author

Aaron C. Daugherty

Stanford University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Organism:C. elegans· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Andrew A. Radin· 1 shared Andrew M Radin· 1 shared Anne BrunetiD· 1 shared Anshul Bharat KundajeiD· 1 shared Carl Farrington· 1 shared Daniel Ford· 1 shared Elizabeth S. Noblin· 1 shared Guy Haskin Fernald· 1 shared

Activity by Year

2017-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Andrew A. Radin

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2 papers

Recent·Most cited

Rapid Identification and Validation of Novel Rheumatoid Arthritis Drug Treatments using an Integrative Bioinformatics Platform

Aaron C. Daugherty, Carl Farrington, Isaac Hakim, Sana Mujahid, Elizabeth S. Noblin, Andrew M Radin, Mei‐Sze Chua, Mark D Rabe, Guy Haskin Fernald, Daniel Ford, Marina Sirota, Laura R. Schaevitz, Andrew A. Radin

The paper identifies and validates three novel drug candidates for rheumatoid arthritis using a computational model integrated with in vivo testing.

bioRxiv · Jan 7, 2018 · PreprintBioinformatics

Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans

Aaron C. Daugherty, Robin W. Yeo, Jason Daniel Buenrostro, William James Greenleaf, Anshul Bharat Kundaje, Anne Brunet

This study uses ATAC-seq in C. elegans to identify dynamic chromatin accessibility changes, revealing novel enhancers and a regulatory factor involved in development.

Genome Research · Dec 1, 2017Peer-reviewedGenomics