Author

Abigail Harvey Paulos

University of California, Berkeley

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Amy J. PickeringiD· 1 shared Benard ChiengiD· 1 shared Caroline E. M. McCormackiD· 1 shared Erica R. FuhrmeisteriD· 1 shared Jenna M. SwarthoutiD· 1 shared Sammy M. NjengaiD· 1 shared Shruteek A. MairaliD· 1 shared Sooyeol KimiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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8 top collaborators · 28 mutual co-author links

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1 shared paperMicrobiology

Amy J. PickeringORCID

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1 paper

Recent·Most cited

MicrobiologyNature CommunicationsPeer-reviewedJul 3, 2025

Context-Seq: CRISPR-Cas9 Targeted Nanopore Sequencing for Transmission Dynamics of Antimicrobial Resistance

Erica R. Fuhrmeister, Sooyeol Kim, Shruteek A. Mairal…·Amy J. Pickering

The paper introduces Context-Seq, a CRISPR-Cas9 targeted nanopore sequencing method to study AMR transmission between humans and animals, identifying shared ARG clusters and potential pathogenic hosts.

15 citationstop 3%

humanmouse

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