Author

Benard Chieng

Kenya Medical Research InstituteORCID 0000-0002-0975-5720Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Abigail Harvey Paulos· 1 shared Amy J. PickeringiD· 1 shared Caroline E. M. McCormackiD· 1 shared Erica R. FuhrmeisteriD· 1 shared Jenna M. SwarthoutiD· 1 shared Sammy M. NjengaiD· 1 shared Shruteek A. MairaliD· 1 shared Sooyeol KimiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperMicrobiology

Abigail Harvey Paulos

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1 paper

Recent·Most cited

Context-Seq: CRISPR-Cas9 Targeted Nanopore Sequencing for Transmission Dynamics of Antimicrobial Resistance

Erica R. Fuhrmeister, Sooyeol Kim, Shruteek A. Mairal, Caroline E. M. McCormack, Benard Chieng, Jenna M. Swarthout, Abigail Harvey Paulos, Sammy M. Njenga, Amy J. Pickering

The paper introduces Context-Seq, a CRISPR-Cas9 targeted nanopore sequencing method to study AMR transmission between humans and animals, identifying shared ARG clusters and potential pathogenic hosts.

Nature Communications · Jul 3, 2025Peer-reviewedMicrobiology