Author

Alaine Naidas

Western University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:scRNA-seq· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Erik ChristenseniD· 2 shared Mia HusićiD· 2 shared Parisa ShooshtariiD· 2 shared Alaina Mahalanabis· 1 shared Arun K RamaniiD· 1 shared Danielle C. CroucheriD· 1 shared David J. CheniD· 1 shared Hillary ElrickiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersBioinformatics

Erik ChristensenORCID

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2 papers

Recent·Most cited

TMExplorer: A Tumour Microenvironment Single-cell RNAseq Database and Search Tool

Erik Christensen, Alaine Naidas, David J. Chen, Mia Husić, Parisa Shooshtari

TMExplorer provides a database and R tool for accessing and analyzing TME scRNA-seq data from 12 cancer types.

PLoS ONE · Sep 9, 2022Peer-reviewedBioinformatics

CReSCENT: CanceR Single Cell ExpressioN Toolkit

Suluxan Mohanraj, J. Javier Díaz-Mejía, Martin D. Pham, Hillary Elrick, Mia Husić, Shaikh Rashid, Ping Luo, Prabnur Bal, Kevin Lu, Samarth Siddharth Patel, Alaina Mahalanabis, Alaine Naidas, Erik Christensen, Danielle C. Croucher, Laura M. Richards, , Trevor J. Pugh

CReSCENT provides a web-based toolkit for analyzing scRNA-seq data in cancer research, offering preconfigured pipelines and user-editable workflows for non-experts.

Nucleic Acids Research · May 13, 2020Peer-reviewedBioinformatics