AI-based separation of malignant cell- and microenvironment-specific gene expression from bulk RNA sequencing enhances biomarker interpretation
Anastasia Zolotar, Daniil S. Wiebe, Arman Petrosyants, Boris Shpak, Natalia Khotkina, Valentina Beliaeva, Ekaterina Ivleva, Linda Balabanian, Maksim Chelushkin, Daniiar Dyikanov, Maria Savchenko, Sheila T. Yong, Danil Litvinov, Anastasia Zotova, Alexander Kuznetsov, , Alexander Bagaev
Helenus separates malignant and microenvironment gene expression from bulk RNA-seq to improve biomarker interpretation in cancer.
bioRxiv · Apr 30, 2026 · PreprintCancer Biology