Author

Alessia Carrara

Centre Hospitalier Universitaire Vaudois

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Claire BertelliiD· 2 shared Trestan PilloneliD· 2 shared Bastian MarquisiD· 1 shared Benoit P. GueryiD· 1 shared Carmen CheniD· 1 shared Grégory ReschiD· 1 shared Julien Schaer· 1 shared Tatiana Katerina GalperineiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 23 mutual co-author links

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2 shared papersMicrobiology

Claire BertelliORCID

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Author profile →

2 papers

Recent·Most cited

Engraftment of donor phageome via fecal microbiota transplantation in recurrent C. difficile infection: a prospective observational study

Carmen Chen, Trestan Pillonel, Alessia Carrara, Julien Schaer, Grégory Resch, Tatiana Katerina Galperine, Benoit P. Guery, Claire Bertelli

This study evaluates phage community preservation during FMT production and engraftment in patients with rCDI, finding donor phages persist in recipients.

bioRxiv · Oct 9, 2025 · PreprintMicrobiology

zDB: bacterial comparative genomics made easy

Bastian Marquis, Trestan Pillonel, Alessia Carrara, Claire Bertelli

zDB integrates genome analysis and visualization tools to simplify comparative genomics by automating orthology prediction, phylogenetic inference, and metabolic pathway comparison across multiple genomes.

mSystems · Jun 28, 2024Peer-reviewedBioinformatics