Author

Alexander Krasnitz

Primary ORCID profile (0000-0002-9465-0308 · 3 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Alexander KrasnitziD3 papers · Cold Spring Harbor Laboratory

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:mouse· 1 Approach:statistical model· 1

Frequent Co-Authors

C. Frank BennettiD· 1 shared David Spector· 1 shared Frank RigoiD· 1 shared Guoli Sun· 1 shared Junyan Song· 1 shared Kung-Chi Chang· 1 shared Sarah D Diermeier· 1 shared Susan M Freier· 1 shared

Activity by Year

2014-2016 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 21 mutual co-author links

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1 shared paperCancer Biology

C. Frank BennettORCID

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2 papers

Recent·Most cited

Identification and characterization of long non-coding RNAs as targets of mammary tumor cell proliferation and migration

Sarah D Diermeier, Kung-Chi Chang, Susan M Freier, Junyan Song, Alexander Krasnitz, Frank Rigo, C. Frank Bennett, David Spector

The paper identifies and characterizes long non-coding RNAs (lncRNAs) as potential therapeutic targets in mammary tumor progression by analyzing RNA-Seq data from mouse models and validating their function in tumor cells.

bioRxiv · Jan 11, 2016Cancer Biology

Significantly distinct branches of hierarchical trees: A framework for statistical analysis and applications to biological data

Guoli Sun, Alexander Krasnitz

The paper introduces TBEST, a method to identify significantly distinct branches in hierarchical trees, and shows it performs well on biological datasets.

BMC Genomics · Jan 1, 2014Peer-reviewedBioinformatics