Author

Alphonse Zaramody

Université de Mahajanga

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:non-human primate· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:multiple species· 1

Frequent Co-Authors

Alejandro ValenzuelaiD· 3 shared Amanda Dawn MeliniD· 3 shared Andrew C. KitcheneriD· 3 shared Arcadi NavarroiD· 3 shared C. Rabarivola· 3 shared Chiea Chuen KhoriD· 3 shared Christian RoosiD· 3 shared David JuaniD· 3 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Alejandro ValenzuelaORCID

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3 papers

Recent·Most cited

The landscape of tolerated genetic variation in humans and primates

Hong Chao Gao, Tobias Hamp, Jeffrey M. Ede, Joshua G. Schraiber, Jeremy F. McRae, Moriel Singer‐Berk, Yanshen Yang, Anastasia S. D. Dietrich, Petko P. Fiziev, Lukas F. K. Kuderna, Laksshman Sundaram, Yibing Wu, Aashish N. Adhikari, Yair Field, Chen Chen, , Kyle Kai‐How Farh

The paper uses primate genetic data to predict human variant pathogenicity with a deep learning classifier trained on 4.3 million common missense variants.

Science · Jun 1, 2023Peer-reviewedGenomics

A global catalog of whole-genome diversity from 233 primate species

Lukas F. K. Kuderna, Hong Chao Gao, Mareike C. Janiak, Martin Kuhlwilm, Joseph Daniel Orkin, Thomas M Bataillon, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Marie C. Rousselle, Felipe Ennes Silva, Lídia Águeda, Julie Marie Blanc, Marta Ortova Gut, Dorien de Vries, , Tomàs Marquès‐Bonet

This study presents whole-genome data from 233 primate species, revealing patterns of genetic diversity, mutation rates, and recurrent missense mutations across primate clades.

Science · Jun 1, 2023Peer-reviewedGenomics

Variation in predicted COVID-19 risk among lemurs and lorises

Amanda Dawn Melin, Joseph Daniel Orkin, Mareike C. Janiak, Alejandro Valenzuela, Lukas F. K. Kuderna, Frank Marrone, Hasinala Ramangason, Julie E. Horvath, Christian Roos, Andrew C. Kitchener, Chiea Chuen Khor, Weng Khong Lim, Jessica G.H. Lee, Patrick B. O. Tan, Govindhaswamy Umapathy, , James P. Higham

The paper analyzes ACE2 gene sequences in strepsirrhine primates to assess their susceptibility to SARS-CoV-2, finding high variability and potential risk in some species.

American Journal of Primatology · Apr 1, 2021Peer-reviewedGenetics