Author

Alyssa Rukshin

Broad Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:software / tool· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Dawei SuniD· 1 shared Fei CheniD· 1 shared Gord FishelliD· 1 shared Grace WangiD· 1 shared Min DaiiD· 1 shared Sherry Jingjing WuiD· 1 shared Tivadar TorokiD· 1 shared Vallari ShendeiD· 1 shared

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2025-2025 · peak 1/yr

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9 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Dawei SunORCID

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1 paper

Recent·Most cited

LARIS enables accurate and efficient ligand and receptor interaction analysis in spatial transcriptomics

Min Dai, Tivadar Torok, Dawei Sun, Vallari Shende, Grace Wang, Yuesang Lin, Sherry Jingjing Wu, Alyssa Rukshin, Gord Fishell, Fei Chen

LARIS identifies cell type-specific and spatially restricted ligand-receptor interactions in spatial transcriptomics data with high accuracy and scalability.

bioRxiv · Nov 26, 2025 · PreprintBioinformatics