Author

Amanda J. MacCallum

Roslin Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genomics· 1

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:matrix factorization· 1 Approach:statistical model· 1

Frequent Co-Authors

Androniki PsifidiiD· 1 shared Chunlei WuiD· 1 shared Cyrus Afrasiabi· 1 shared David Arthur HumeiD· 1 shared Jacqueline SmithiD· 1 shared Jenny O’Dell· 1 shared KIM M. SUMMERSiD· 1 shared Lucy J. Freem· 1 shared

Activity by Year

2018-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Androniki PsifidiORCID

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1 paper

Recent·Most cited

Combination of novel and public RNA-seq datasets to generate an mRNA expression atlas for the domestic chicken

Stephen J. Bush, Lucy J. Freem, Amanda J. MacCallum, Jenny O’Dell, Chunlei Wu, Cyrus Afrasiabi, Androniki Psifidi, Mark P. Stevens, Jacqueline Smith, KIM M. SUMMERS, David Arthur Hume

The paper integrates public and new RNA-seq data to create a chicken mRNA expression atlas, revealing tissue-specific gene clusters and developmental patterns.

BMC Genomics · Aug 7, 2018Peer-reviewedGenomics