Author

Amber Neilson

Washington University in St. Louis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 1 Genetic & Genomic Medicine· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Xiaoxia CuiiD· 3 shared Matthew W. MitchelliD· 2 shared Monica F. SentmanatiD· 2 shared Ting WangiD· 2 shared 9P-ARCH· 1 shared Allan Micheil InnesiD· 1 shared Amjad HoraniiD· 1 shared Anantha Kethireddy· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersGenomics

Xiaoxia CuiORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Fully T2T pedigree assemblies reveal genetic stability and epigenetic plasticity of human centromeres across inheritance and cell-fate transitions

Shihua Dong, Xiaoyun Xing, Monika Čechová, Hailey Loucks, Selvamani Vijayalingam, Amber Neilson, Monica F. Sentmanat, Juan F. Macias-Velasco, T -C Liu, Zheng Dong, Benpeng Miao, Wenjin Zhang, Chad Tomlinson, Heather K. Schmidt, Edward A. Belter, , Ting Wang

The paper uses fully phased telomere-to-telomere assemblies and long-read epigenomes to study centromere genetic and epigenetic dynamics across inheritance and cell-fate transitions, finding positional stability of CDRs and dynamic epigenetic changes.

bioRxiv · Feb 17, 2026 · PreprintGenomics

Whole-Genome Sequencing Reveals Individual and Cohort Level Insights into Chromosome 9p Syndromes

Yingxi Wang, Eleanor I. Sams, Rachel Slaugh, Sandra Crocker, Emily Cordova Hurtado, Sophia Tracy, Ying‐Chen Claire Hou, Christopher Markovic, Kostandin Valle, Victoria Tate, Khadija Belhassan, Elizabeth L. Appelbaum, Titilope M. Akinwe, Rodrigo Tzovenos Starosta, Yang Cao, , Tychele N. Turner

This study uses whole-genome sequencing to analyze 9p deletion and duplication syndromes, identifying key genes and structural variants, and introduces a machine learning model for syndrome prediction.

Genome Medicine · Oct 24, 2025Peer-reviewedGenetic & Genomic Medicine

A new NHGRI Sample Repository for Human Genetic Research collection of induced pluripotent stem cell lines.

Tatyana Pozner, Christine Grandizio, Matthew W. Mitchell, Xiaoxia Cui, Amber Neilson, Monica F. Sentmanat, Ting Wang, Nathan O Stitziel, Nahid Turan, Laura Scheinfeldt

The paper describes a new NHGRI Sample Repository containing seven iPSC lines generated from PBMCs, with genomic data for studying genetic variation and its functional implications.

bioRxiv · Aug 5, 2025 · PreprintCell Biology