Author

Amritha Jaishankar

Lieber Institute for Brain Development

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Alan J. CrossiD· 2 shared Carlo ColantuoniiD· 2 shared Daniel J. HoeppneriD· 2 shared Daniel R. WeinbergeriD· 2 shared Joel E. KleinmaniD· 2 shared Joo Heon ShiniD· 2 shared Josh G. ChenowethiD· 2 shared Nicholas J. BrandoniD· 2 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersDevelopmental Biology

Alan J. CrossORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Expression bias in retinoic acid responsive genes defines variations in neural differentiation of human pluripotent stem cells

Suel–Kee Kim, Seungmae Seo, Genevieve Stein-O’Brien, Amritha Jaishankar, Kazuya Ogawa, Nicola Micali, Victor A Luria, Amir Karger, Yanhong Wang, Thomas M. Hyde, Joel E. Kleinman, Ty C. Voss, Elana Judith Fertig, Joo Heon Shin, Roland W. Bürli, , Ronald D.G. McKay

The paper identifies transcriptomic differences in human pluripotent stem cells that correlate with retinoic acid response and neural fate bias.

bioRxiv · Mar 17, 2021 · PreprintDevelopmental Biology

Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs

Emily E. Burke, Josh G. Chenoweth, Joo Heon Shin, Leonardo Collado‐Torres, Suel–Kee Kim, Nicola Micali, Yanhong Wang, Carlo Colantuoni, Richard E. Straub, Daniel J. Hoeppner, Huei-Ying Chen, Alana Sellers, Kamel Shibbani, Gregory R. Hamersky, Marcelo Diaz Bustamante, , Andrew E. Jaffe

The paper uses hiPSC transcriptomics to study neuronal differentiation and maturation across multiple conditions and develops a tool to estimate neuronal maturity.

Nature Communications · Jan 23, 2020Peer-reviewedGenomics