Author

Andrew Ponomarev

Provincial Health Services Authority

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Adam Lipski· 1 shared Alexander Tischenko· 1 shared Amanjeev SethiiD· 1 shared Carl VirtaneniD· 1 shared Dashaylan Naidoo· 1 shared David BujoldiD· 1 shared David M. MalkiniD· 1 shared Dmitriy Osipenko· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Adam Lipski

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GRAPE: Genomic Relatedness Detection Pipeline

Александр Владимирович Медведев, Mikhail Lebedev, Andrew Ponomarev, Mikhail Kosaretskiy, Dmitriy Osipenko, Alexander Tischenko, Egor Kosaretskiy, Hui Wang, Dmitry S. Kolobkov, Vitalina Chamberlain-Evans, Ruslan Vakhitov, Pavel Nikonorov

GRAPE is a genomic relatedness detection pipeline that accurately classifies kinship degrees using preprocessing, IBD detection, and relationship estimation.

F1000Research · May 30, 2022Peer-reviewedBioinformatics

CanDIG: Secure Federated Genomic Queries and Analyses Across Jurisdictions

Lewis Jonathan Dursi, Zoltán Bozóky, Richard de Borja, Jimmy Li, David Bujold, Adam Lipski, Shaikh Farhan Rashid, Amanjeev Sethi, Neelam Memon, Dashaylan Naidoo, Felipe Coral-Sasso, Matthew Wong, Pierre-Olivier Quirion, Zhibin Lu, Samarth Agarwal, , Michael Brudno

CanDIG enables secure, federated genomic and health data analysis across jurisdictions while maintaining data locality and privacy.

bioRxiv · Mar 30, 2021 · PreprintGenomics