MerQuaCo: a computational tool for quality control in image-based spatial transcriptomics
Naomi X. Martin, Paul A. Olsen, Jacob Quon, Jazmin Campos, Nasmil Valera Cuevas, Josh Nagra, Marshall VanNess, Zoe Maltzer, Emily C. Gelfand, Alana A. Oyama, Amanda Gary, Yimin Wang, Angela Alaya, Augustin Ruiz, Cade Reynoldson, , Jack Waters
The paper introduces MerQuaCo, an open-source tool to automatically detect and quantify imperfections in spatial transcriptomics data, improving quality assessment.
bioRxiv · Dec 4, 2024 · PreprintBioinformatics