Author

B. B. McGivern

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 5 Research Focus:cell type annotation· 3 Approach:statistical model· 3 Research Focus:database / resource· 2 Research Focus:ecology & biodiversity· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

K. C. Wrighton· 5 shared M. A. Borton· 5 shared R. A. Daly· 4 shared A. B. Narrowe· 2 shared B. J. Woodcroft· 2 shared D. W. Hoyt· 2 shared G. J. Smith· 2 shared J. B. Ellenbogen· 2 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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5 shared papersMicrobiology

K. C. Wrighton

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Author profile →

5 papers

Recent·Most cited

Mapping the soil microbiome functions shaping wetland methane emissions

M. A. Borton, A. M. Oliverio, A. B. Narrowe, J. A. Villa, C. Rinke, D. W. Hoyt, P. Liu, B. B. McGivern, E. K. Bechtold, J. B. Ellenbogen, R. A. Daly, G. J. Smith, J. C. Angle, R. M. Flynn, A. P. Freiburger, , K. C. Wrighton

The paper maps soil microbiome functions in wetlands to understand methane emissions by analyzing microbial communities and gene expression across spatial and temporal gradients.

bioRxiv · Feb 6, 2024Microbiology

Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost

J. B. Ellenbogen, M. A. Borton, B. B. McGivern, D. R. Cronin, D. W. Hoyt, V. Freire-Zapata, C. K. McCalley, R. K. Varner, P. M. Crill, R. A. Wehr, J. P. Chanton, B. J. Woodcroft, M. M. Tfaily, G. W. Tyson, V. I. Rich, K. C. Wrighton

This study identifies methylotrophic methanogenesis and bacterial methylotrophy as significant contributors to methane production in thawing permafrost.

mSystems · Jan 23, 2024Peer-reviewedMicrobiology

A functional microbiome catalog crowdsourced from North American rivers

M. A. Borton, B. B. McGivern, K. R. Willi, B. J. Woodcroft, A. C. Mosier, D. M. Singleton, T. Bambakidis, A. C. Pelly, F. Liu, J. N. Edirisinghe, J. P. Faria, I. Leleiwi, R. A. Daly, A. E. Goldman, M. J. Wilkins, , K. C. Wrighton

The paper creates GROWdb, a microbiome database from North American rivers, revealing microbial community structures and functional traits across watersheds.

bioRxiv · Jul 22, 2023 · PreprintMicrobiology

Variation in root exudate composition influences soil microbiome membership and function

V. A. Seitz, B. B. McGivern, M. A. Borton, J. M. Chaparro, R. A. Daly, A. M. Sheflin, S. Kresovich, L. Shields, M. E. Schipanski, K. C. Wrighton, J. Prenni

This study shows that different root exudate compositions from sorghum genotypes alter soil microbial community structure and function, with implications for crop production.

bioRxiv · Nov 4, 2021Plant Biology

DRAM for distilling microbial metabolism to automate the curation of microbiome function

M. Shaffer, M. A. Borton, B. B. McGivern, A. A. Zayed, S. L. La Rosa, L. M. Solden, P. Liu, A. B. Narrowe, J. Rodriguez-Ramos, B. Bolduc, M. C. Gazitua, R. A. Daly, G. J. Smith, D. R. Vik, P. B. Pope, , K. C. Wrighton

DRAM automates microbiome function curation by translating genomic data into microbial traits, accurately assigning metabolic roles in soil and gut communities.

Nucleic Acids Research · Aug 7, 2020Peer-reviewedMicrobiology