Author

R. M. Flynn

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:ecology & biodiversity· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Organism:mouse· 1

Frequent Co-Authors

M. A. Borton· 3 shared R. A. Daly· 3 shared K. C. Wrighton· 2 shared M. Shaffer· 2 shared A. B. Narrowe· 1 shared A. Goldman· 1 shared A. M. Oliverio· 1 shared A. Oliverio· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersMicrobiology

M. A. Borton

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Mapping the soil microbiome functions shaping wetland methane emissions

M. A. Borton, A. M. Oliverio, A. B. Narrowe, J. A. Villa, C. Rinke, D. W. Hoyt, P. Liu, B. B. McGivern, E. K. Bechtold, J. B. Ellenbogen, R. A. Daly, G. J. Smith, J. C. Angle, R. M. Flynn, A. P. Freiburger, , K. C. Wrighton

The paper maps soil microbiome functions in wetlands to understand methane emissions by analyzing microbial communities and gene expression across spatial and temporal gradients.

bioRxiv · Feb 6, 2024Microbiology

Spatial and temporal metagenomics of river compartments reveals viral community dynamics in an urban impacted stream

J. A. Rodriguez-Ramos, A. Oliverio, M. A. Borton, R. E. Danczak, B. M. Mueller, H. Schulz, J. Ellenbogen, R. M. Flynn, R. A. Daly, L. Schopflin, M. Shaffer, A. Goldman, J. Lewandowski, J. Stegen, K. Wrighton

The paper analyzes spatial and temporal metagenomic data from a wastewater-impacted river to reveal viral and microbial community dynamics and their potential roles in biogeochemical cycles.

bioRxiv · Apr 4, 2023 · PreprintMicrobiology

Exposing New Taxonomic Variation with Inflammation-A Murine Model-Specific Genome Database for Gut Microbiome Researchers

I. Leleiwi, J. Rodriguez-Ramos, M. Shaffer, A. Sabag-Daigle, K. Kokkinias, R. M. Flynn, R. A. Daly, L. F. Kop, L. M. Solden, B. M. M. Ahmer, M. A. Borton, K. C. Wrighton

The paper presents a genomic catalog of the CBA/J murine gut microbiome, revealing taxonomic and functional changes during Salmonella-induced inflammation.

bioRxiv · Oct 24, 2022 · PreprintMicrobiology