Author

A. E. Goldman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 5 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:ecology & biodiversity· 6 Assay:metagenomics· 5 Assay:metabolomics· 4 Research Focus:benchmarking· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Research Focus:database / resource· 2 Approach:deep learning· 1

Frequent Co-Authors

E. B. Graham· 5 shared J. C. Stegen· 4 shared R. E. Danczak· 4 shared R. K. Chu· 4 shared J. G. Toyoda· 3 shared L. Renteria· 3 shared V. A. Garayburu-Caruso· 3 shared C. T. Resch· 2 shared

Activity by Year

2017-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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5 shared papersEcology

E. B. Graham

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Meta-metabolome ecology reveals that geochemistry and microbial functional potential are linked to organic matter development across seven rivers

R. E. Danczak, A. E. Goldman, M. A. Borton, R. K. Chu, J. G. Toyoda, V. A. Garayburu-Caruso, E. B. Graham, J. W. Morad, L. Renteria, J. R. Hager, S. Arnon, S. Brooks, E. Bar-Zeev, M. Jones, N. Jones, , J. C. Stegen

The paper links geochemistry and microbial functional potential to organic matter development across seven rivers using DOM characterization, geochemical analyses, and shotgun metagenomics.

bioRxiv · Jan 10, 2024 · PreprintEcology

A functional microbiome catalog crowdsourced from North American rivers

M. A. Borton, B. B. McGivern, K. R. Willi, B. J. Woodcroft, A. C. Mosier, D. M. Singleton, T. Bambakidis, A. C. Pelly, F. Liu, J. N. Edirisinghe, J. P. Faria, I. Leleiwi, R. A. Daly, A. E. Goldman, M. J. Wilkins, , K. C. Wrighton

The paper creates GROWdb, a microbiome database from North American rivers, revealing microbial community structures and functional traits across watersheds.

bioRxiv · Jul 22, 2023 · PreprintMicrobiology

Using Community Science to Reveal the Global Chemogeography of River Metabolomes

V. A. Garayburu-Caruso, R. E. Danczak, J. Stegen, L. Renteria, M. MacCall, A. E. Goldman, R. K. Chu, J. Toyoda, C. T. Resch, J. M. Torgeson, J. Wells, S. Fansler, S. Kumar, E. B. Graham

This study uses community science to analyze global river metabolomes, revealing differences between surface water and sediment and significant spatial variation in sediment metabolites.

bioRxiv · Nov 2, 2020Ecology

Ecological theory applied to environmental metabolomes reveals compositional divergence despite conserved molecular properties

R. E. Danczak, A. E. Goldman, R. K. Chu, J. G. Toyoda, V. A. Garayburu-Caruso, N. Tolic, E. B. Graham, J. Morad, L. Renteria, J. R. Wells, S. P. Herzog, A. S. Ward, J. C. Stegen

The paper applies ecological theory to environmental metabolomes, revealing compositional divergence despite conserved molecular properties through the concept of thermodynamic redundancy.

bioRxiv · Feb 12, 2020Ecology

Unification of Environmental Metabolomics with Metacommunity Ecology

R. E. Danczak, R. K. Chu, S. J. Fansler, A. E. Goldman, E. B. Graham, M. M. Tfaily, J. G. Toyoda, J. C. Stegen

The paper unifies environmental metabolomics with metacommunity ecology to analyze NOM composition using ecological metrics and dendrograms.

bioRxiv · Jan 31, 2020 · PreprintEcology

NETosis proceeds by cytoskeleton and endomembrane disassembly and PAD4-mediated chromatin de-condensation and nuclear envelope rupture

C. M. Waterman, H. R. Thiam, S. L. Wong, R. Qiu, M. Kittisopikul, A. V. Vahabikashi, A. E. Goldman, R. D. V. Goldman, D. D. Wagner

This study uses live-cell imaging to characterize the step-wise cellular events of NETosis in neutrophils and identifies PAD4's role in chromatin de-condensation and nuclear envelope rupture.

bioRxiv · Jun 6, 2019Immunology

Carbon inputs from riparian vegetation limit oxidation of physically-bound organic carbon via biochemical and thermodynamic processes

E. B. Graham, M. Tfaily, A. R. Crump, A. E. Goldman, L. Bramer, E. Arntzen, E. Romero, C. T. Resch, D. W. Kennedy, J. C. Stegen

The paper investigates how riparian vegetation affects oxidation of physically-bound organic carbon through biochemical and thermodynamic processes in the Columbia River corridor.

bioRxiv · Oct 15, 2017Ecology