Author

B. L. Montgomery

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 4

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

A. Y. Husbands· 2 shared S. Palande· 2 shared A. Bleich· 1 shared A. K. Steensma· 1 shared A. Krishnan· 1 shared A. Lopez-Hernandez· 1 shared A. Luckie-Duque· 1 shared A. M. Schumacher· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersPlant Biology

A. Y. Husbands

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4 papers

Recent·Most cited

Expression-based machine learning models for predicting plant tissue identity

S. Palande, J. Arsenault, P. Basurto-Lozada, A. Bleich, B. N. I. Brown, S. F. Buysse, N. A. Connors, S. Das Adhikari, K. C. Dobson, F. X. Guerra-Castillo, M. F. Guerrero-Carrillo, S. Harlow, H. Herrera-Orozco, A. T. Hightower, P. Izquierdo, , Krishnan

The paper uses Arabidopsis gene expression data to train machine learning models for predicting tissue identity in other flowering plants, finding that gene expression signatures are more predictive than marker genes.

bioRxiv · Aug 20, 2023Plant Biology

The topological shape of gene expression across the evolution of flowering plants

S. Palande, J. A. M. Kaste, M. D. Roberts, K. Segura Aba, C. Claucherty, J. Dacon, R. Doko, T. B. Jayakody, H. R. Jeffery, N. Kelly, A. Manousidaki, H. M. Parks, E. M. Roggenkamp, A. M. Schumacher, J. Yang, , R. VanBuren

This paper uses topological data analysis to create a topological representation of gene expression across flowering plants, revealing conserved expression patterns linked to tissues and stress responses.

bioRxiv · Sep 7, 2022 · PreprintPlant Biology

Aureochromes are necessary for maintaining polyunsaturated fatty acid content in Nannochloropsis oceanica

E. M. Farre, E. Poliner, A. W. Busch, L. Newton, Y. U. Kim, R. Clark, S. C. Gonzalez-Martinez, B.-r. Jeong, B. L. Montgomery

This study shows that aureochromes in Nannochloropsis oceanica regulate blue light-induced fatty acid desaturases, which are essential for maintaining polyunsaturated fatty acid levels.

bioRxiv · Jan 27, 2021 · PreprintPlant Biology

Synthetic OCP Heterodimers are Photoactive and Recapitulate the Fusion of Two Primitive Carotenoproteins in the Evolution of Cyanobacterial Photoprotection

S. Lechno-Yossef, M. R. Melnicki, H. Bao, B. L. Montgomery, C. A. Kerfeld

bioRxiv · Jan 21, 2017Plant Biology