Author

B. Y. Karlan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1

Frequent Co-Authors

A. Gusev· 2 shared J. Reddy· 2 shared J.-H. Seo· 2 shared K. Lawrenson· 2 shared M. L. Freedman· 2 shared R. I. Corona· 2 shared S. A. Gayther· 2 shared X. Lin· 2 shared

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2019-2019 · peak 2/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersCancer Biology

A. Gusev

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2 papers

Recent·Most cited

Cancer BiologybioRxivNov 12, 2019

Predicting master transcription factors from pan-cancer expression data

J. Reddy, M. A. S. Fonseca, R. I. Corona…·K. Lawrenson

This paper introduces CaCTS, an algorithm that identifies candidate master transcription factors (MTFs) across 34 cancer types using RNA-seq data, revealing novel MTFs and functional groupings.

DOI 10.1126/sciadv.abf6123

humanbulk RNA-seq

𝕏 PostBluesky

Cancer BiologybioRxivFeb 1, 2019

Non-coding Somatic Mutations Converge on the PAX8 Pathway in Epithelial Ovarian Cancer

R. I. Corona, J.-H. Seo, X. Lin…·K. Lawrenson

The paper identifies histotype-specific regulatory elements in ovarian cancer by integrating chromatin landscapes and somatic mutations, highlighting the PAX8 pathway's role in tumor development.

DOI 10.1038/s41467-020-15951-0

humanChIP-seq

𝕏 PostBluesky