Author

Ben P. Bowen

Lawrence Berkeley National Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Aaron A. BestiD· 1 shared Adam P. ArkiniD· 1 shared Alen Zimic· 1 shared Annette GreineriD· 1 shared Benjamin H. AlleniD· 1 shared Brian H. DavisoniD· 1 shared Bruce Parrello· 1 shared Christopher Bun· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Aaron A. BestORCID

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Author profile →

2 papers

Recent·Most cited

Uncovering the hidden diversity and functional roles of root endophytic Streptomyces under drought stress

Citlali Fonseca-García, Dean Pettinga, Daniel F. Caddell, Hannah Ploemacher, Katherine Louie, Ben P. Bowen, Joelle Park, Jesús Sánchez, Alen Zimic, Matthew F. Traxler, Trent R. Northen, Devin Coleman‐Derr

This study identifies strain-specific functional diversity in Streptomyces endophytes under drought stress, showing enrichment does not correlate with plant growth promotion.

bioRxiv · Jun 25, 2025 · PreprintMicrobiology

The DOE Systems Biology Knowledgebase (KBase)

Adam P. Arkin, Robert W. Cottingham, Christopher S. Henry, Nomi L. Harris, Rick L. Stevens, Sergei Maslov, Paramvir Dehal, Doreen Ware, Fernando Pérez, Richard Shane Canon, Michael W. Sneddon, Matthew L Henderson, William J. Riehl, Dan Murphy-Olson, Stephen Y. Chan, , Dantong Yu

Open-source KBase platform unites reference genomes and biochemistry, over 70 apps, Jupyter-based Narratives with provenance, and a Docker SDK for reproducible plant and microbial systems biology.

Nature Biotechnology · Jul 1, 2018Peer-reviewedBioinformatics✦ In-depth digest