In vivo detection of DNA secondary structures using Permanganate/S1 Footprinting with Direct Adapter Ligation and Sequencing (PDAL-Seq)
Angelika Lahnsteiner, Sarah J. C. Craig, Kaivan Kamali, Bernadette Weissensteiner, Barbara C. McGrath, Angela Risch, Kateryna D. Makova
The paper introduces PDAL-Seq, a method to detect DNA secondary structures in vivo, and provides a standardized analysis pipeline.
bioRxiv · Nov 28, 2023 · PreprintMolecular Biology