Author

C. A. Lozupone

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Assay:metagenomics· 5 Approach:statistical model· 4 Organism:human· 3 Research Focus:clustering· 2 Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:comparative / phylogenetic analysis· 1

Frequent Co-Authors

N. M. Nusbacher· 3 shared A. J. Armstrong· 2 shared B. E. Palmer· 2 shared J. L. Darcy· 2 shared J. M. Schneider· 2 shared N. Reisdorph· 2 shared S. Fiorillo· 2 shared S. X. Li· 2 shared

Activity by Year

2018-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersMicrobiology

N. M. Nusbacher

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Author profile →

5 papers

Recent·Most cited

Dietary fat promotes antibiotic-induced Clostridioides difficile mortality in mice

K. Z. Hazleton, C. G. Martin, D. J. Orlicky, K. L. Arnolds, N. M. Nusbacher, N. Moreno-Huizar, M. L. Armstrong, N. Reisdorph, C. A. Lozupone

A high-fat/low-fiber Western diet increased mortality in antibiotic-induced C. difficile infection in mice compared to low-fat/low-fiber and chow diets, suggesting lower fat may prevent CDI.

npj Biofilms and Microbiomes · Apr 1, 2022Peer-reviewedMicrobiology

specificity: an R package for analysis of feature specificity to environmental and higher dimensional variables, applied to microbiome species data

J. L. Darcy, A. S. Amend, S. O. I. Swift, P. S. Sommers, C. A. Lozupone

The paper introduces an R package called specificity to analyze feature specificity to environmental and higher-dimensional variables, applied to microbiome species data to reveal hidden patterns.

bioRxiv · Nov 6, 2021Microbiology

Systems analysis of gut microbiome influence on metabolic disease in HIV and high-risk populations

A. J. Armstrong, K. Quinn, J. Fouquier, S. X. Li, J. M. Schneider, N. M. Nusbacher, K. A. Doenges, S. Fiorillo, T. J. Marden, J. Higgins, N. Reisdorph, T. B. Campbell, B. E. Palmer, C. A. Lozupone

The paper investigates the relationship between gut microbiome, metabolic health, and inflammation in HIV-positive and high-risk men who have sex with men, finding that elevated lipopolysaccharide binding protein (LBP) is a key predictor of metabolic disease.

bioRxiv · Mar 12, 2021Microbiology

A phylogenetic model for the recruitment of species into microbial communities and application to studies of thehuman microbiome

J. L. Darcy, A. D. Washburne, M. S. Robeson, T. Prest, S. K. Schmidt, C. A. Lozupone

The paper develops a phylogenetic model to study microbial community assembly and applies it to human microbiome data, finding underdispersion in most cases.

bioRxiv · Jan 28, 2020Microbiology

An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men

A. J. Armstrong, M. Shaffer, N. M. Nusbacher, C. Griesmer, S. Fiorillo, J. M. Schneider, C. P. Neff, S. X. Li, A. P. Fontenot, T. Campbell, B. E. Palmer, C. A. Lozupone

The paper examines microbiome differences in HIV-infected and uninfected men who have sex with men, identifying lifestyle, ART, and HIV-related factors influencing gut microbiota composition.

bioRxiv · Sep 23, 2018Microbiology