gcaPDA: A Haplotype-resolved Diploid Assembler
Min Xie, Linfeng Yang, Chenglin Jiang, Shenshen Wu, Cheng Luo, Xin Yang, Lijuan He, Shixuan Chen, Tianquan Deng, Mingzhi Ye, Jianbing Yan, Ning Yang
The paper introduces gcaPDA, a diploid assembler that uses haploid gamete cells to resolve haplotypes, and demonstrates its effectiveness on a complex maize genome.
BMC Bioinformatics · Feb 14, 2022Peer-reviewedGenomics