ATLAS: Analysis Tools for Low-depth and Ancient Samples
Vivian Link, Athanasios Kousathanas, Krishna R. Veeramah, Christian Sell, Amelie Scheu, Daniel Wegmann
ATLAS, a C++ toolkit that models post-mortem damage when genotyping ancient or low-depth BAM data, avoided GATK's reference bias and made fewer errors at higher depth in simulations.
bioRxiv · Mar 24, 2017 · PreprintBioinformatics✦ In-depth digest