FinaleMe: Predicting DNA methylation by the fragmentation patterns of plasma cell-free DNA
Yaping Liu, Sarah C. Reed, Christopher Lo, Atish Dipankar Choudhury, Heather Anne Parsons, Daniel G. Stover, Gavin Ha, Gregory Gydush, Justin Rhoades, Denisse Rotem, Samuel S. Freeman, David Katz, Ravi Bandaru, Haizi Zheng, Hailu Fu, , M Kellis
FinaleMe predicts DNA methylation and tissues-of-origin from plasma whole-genome sequencing by using a non-homogeneous Hidden Markov Model.
Nature Communications · Mar 30, 2024Peer-reviewedBioinformatics