Author

D. E. Miller

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2

Signature Assays, Organisms & Methods

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Organism:Drosophila· 2 Approach:experimental assay· 2 Assay:whole-genome sequencing· 2 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

A. A. Comeault· 2 shared A. Kopp· 2 shared A. Takahashi· 2 shared B. Y. Kim· 2 shared D. A. Petrov· 2 shared D. K. Price· 2 shared M. J. Toda· 2 shared O. Barmina· 2 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersEvolutionary Biology

A. A. Comeault

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2 papers

Recent·Most cited

Single-fly assemblies fill major phylogenomic gaps across the Drosophilidae Tree of Life

B. Y. Kim, H. R. Gellert, S. H. Church, A. Suvorov, S. S. Anderson, O. Barmina, S. G. Beskid, A. A. Comeault, K. N. Crown, S. E. Diamond, S. Dorus, T. Fujichika, J. A. Hemker, J. Hrcek, M. Kankare, , D. A. Petrov

The paper presents 183 new genome assemblies for 179 drosophilid species using single-fly long-read sequencing, improving phylogenomic coverage and enabling a well-resolved multi-locus phylogeny.

bioRxiv · Oct 2, 2023 · PreprintEvolutionary Biology

Highly contiguous assemblies of 101 drosophilid genomes

B. Y. Kim, J. Wang, D. E. Miller, O. Barmina, E. K. Delaney, A. Thompson, A. A. Comeault, D. Peede, E. R. R. D'Agostino, J. Pelaez, J. M. Aguilar, D. Haji, T. Matsunaga, E. E. Armstrong, M. Zych, , D. A. Petrov

The paper presents high-quality genome assemblies for 101 drosophilid lines using Oxford Nanopore sequencing, achieving high contig N50 and BUSCO completeness.

bioRxiv · Dec 14, 2020Evolutionary Biology