Author

D. Torkamaneh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 8

Signature Assays, Organisms & Methods

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Organism:C. elegans· 4 Approach:statistical model· 4 Research Focus:gene regulatory network inference· 3 Research Focus:GWAS / association mapping· 3 Organism:plant (other)· 3 Assay:whole-genome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2

Frequent Co-Authors

A. M. P. Jones· 2 shared I. Rajcan· 2 shared K. Adamek· 2 shared M. de Ronne· 2 shared M. Eskandari· 2 shared S. Torabi· 2 shared A. S. Monthony· 1 shared A. Sreedasyam· 1 shared

Activity by Year

2019-2023 · peak 5/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersPlant Biology

A. M. P. Jones

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8 papers

Recent·Most cited

Optimizing ex-vitro one-step RUBY-equipped hairy root transformation in drug- and hemp-type Cannabis

L. Ajdanian, M. Niazian, D. Torkamaneh

This study optimizes ex-vitro one-step hairy root transformation in Cannabis using the RUBY system, finding higher transformation efficiency with A4 strain and drug-type seedlings.

bioRxiv · Nov 29, 2023 · PreprintPlant Biology

Genetic Insights into Agronomic and Morphological Traits of Drug-Type Cannabis Revealed by Genome-Wide Association Studies

M. de Ronne, E. Lapierre, D. Torkamaneh

This study performs GWAS on drug-type Cannabis to identify genetic markers associated with agronomic and morphological traits using HD-GBS and statistical methods.

bioRxiv · Nov 9, 2023Plant Biology

Comparative Restriction Enzyme Analysis of Methylation (CREAM) Reveals Methylome Variability Within a Clonal In Vitro Cannabis Population

J. Boissinot, K. Adamek, A. M. P. Jones, E. Normandeau, B. Boyle, D. Torkamaneh

The paper introduces CREAM, a method to assess DNA methylation in cannabis clones, finding preserved methylation patterns across subcultures and identifying epigenetic variability in tissue-cultured cannabis.

bioRxiv · Aug 18, 2023 · PreprintPlant Biology

Soybean-SCN duel: Novel insight into Soybean's Resistant Responses to Heterodera glycines

S. Torabi, S. Seifi, J. Geddes-McAlister, A. Tenuta, O. Wally, D. Torkamaneh, M. Eskandari

This study uses dual RNA-seq to analyze soybean resistance mechanisms against SCN, identifying key pathways and genes involved in resistance and virulence.

bioRxiv · May 22, 2023 · PreprintPlant Biology

Exploring Ethylene-Related Genes in Cannabis sativa: Implications for Sexual Plasticity

A. S. Monthony, M. de Ronne, D. Torkamaneh

The paper investigates ethylene-related genes in Cannabis sativa to understand their role in sexual plasticity using transcriptomic data and pathway reconstruction.

bioRxiv · Apr 28, 2023 · PreprintPlant Biology

Machine Learning based Genome-Wide Association Studies for Uncovering QTL Underlying Soybean Yield and its Components

M. Yoosefzadeh Najafabadi, S. Torabi, D. Torkamaneh, D. Tulpan, I. Rajcan, M. Eskandari

This study uses machine learning algorithms in GWAS to identify QTL associated with soybean yield components, finding SVR outperforms conventional methods.

bioRxiv · Jun 24, 2021Plant Biology

Accumulation of somatic mutations leads to genetic mosaicism in Cannabis

K. Adamek, A. M. P. Jones, D. Torkamaneh

This study finds that somatic mutations accumulate in Cannabis plants, leading to genetic mosaicism and potential impacts on cannabinoid content and plant vigor.

bioRxiv · Feb 11, 2021Plant Biology

Soybean Haplotype Map (GmHapMap): A Universal Resource for Soybean Translational and Functional Genomics

D. Torkamaneh, J. Laroche, B. Valliyodan, L. O'Donoughue, E. Cober, I. Rajcan, R. Vilela Abdelnoor, A. Sreedasyam, J. Schmutz, H. T. Nguyen, F. Belzile

The paper constructs a soybean haplotype map (GmHapMap) using whole-genome sequences, identifies a causal SNP for seed oil content, and predicts LOF mutations to aid in soybean genomics and breeding.

bioRxiv · Jan 29, 2019 · PreprintPlant Biology