Author

Daisuke Igarashi

University of Minnesota

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 2

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Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2

Frequent Co-Authors

Fumiaki KatagiriiD· 2 shared Kenichi TsudaiD· 2 shared Rachel HillmeriD· 2 shared Thomas Stoddard· 2 shared Xiaotong LiuiD· 2 shared You LuiD· 2 shared Chad L. MyersiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersSystems Biology

Fumiaki KatagiriORCID

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2 papers

Recent·Most cited

The kinetics and basal levels of the transcriptome response during Effector-Triggered Immunity in Arabidopsis are mainly controlled by four immune signaling sectors

Rachel Hillmer, Daisuke Igarashi, Thomas Stoddard, You Lu, Xiaotong Liu, Kenichi Tsuda, Fumiaki Katagiri

Journal of Bioinformatics and Systems Biology · Jan 1, 2023Peer-reviewedSystems Biology

Dynamic decomposition of transcriptome responses during plant effector-triggered immunity revealed conserved responses in two distinct cell populations

Xiaotong Liu, Daisuke Igarashi, Rachel Hillmer, Thomas Stoddard, You Lu, Kenichi Tsuda, Chad L. Myers, Fumiaki Katagiri

The paper decomposes double-peak transcriptome responses in Arabidopsis during effector-triggered immunity into two single-peak patterns, revealing conserved responses in distinct cell populations.

bioRxiv · Dec 30, 2022 · PreprintSystems Biology