Author

Xiaotong Liu

University of MinnesotaORCID 0000-0002-9164-5642Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Organism:human· 1

Frequent Co-Authors

Chad L. MyersiD· 2 shared Daisuke Igarashi· 2 shared Fumiaki KatagiriiD· 2 shared Kenichi TsudaiD· 2 shared Rachel HillmeriD· 2 shared Thomas Stoddard· 2 shared You LuiD· 2 shared Benjamin Oately· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersSystems Biology

Chad L. MyersORCID

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3 papers

Recent·Most cited

Systems BiologyJournal of Bioinformatics and Systems BiologyPeer-reviewedJan 1, 2023

The kinetics and basal levels of the transcriptome response during Effector-Triggered Immunity in Arabidopsis are mainly controlled by four immune signaling sectors

Rachel Hillmer, Daisuke Igarashi, Thomas Stoddard…·Fumiaki Katagiri

3 citations

Arabidopsisbulk RNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintDec 30, 2022

Dynamic decomposition of transcriptome responses during plant effector-triggered immunity revealed conserved responses in two distinct cell populations

Xiaotong Liu, Daisuke Igarashi, Rachel Hillmer…·Fumiaki Katagiri

The paper decomposes double-peak transcriptome responses in Arabidopsis during effector-triggered immunity into two single-peak patterns, revealing conserved responses in distinct cell populations.

6 citations

Arabidopsisbulk RNA-seq

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GeneticsNature CommunicationsPeer-reviewedSep 19, 2019

Discovering genetic interactions bridging pathways in genome-wide association studies

Gang Fang, Wen Wang, Vanja Paunić…·Chad L. Myers

This paper introduces BridGE, a method to detect pathway-level genetic interactions from GWAS data, revealing significant interactions in multiple diseases.

103 citations

humanGWAS summary statistics

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