nf-core/airrflow: an adaptive immune receptor repertoire analysis workflow employing the Immcantation framework
Gisela Gabernet, Susanna Marquez, Robert D. Bjornson, Alexander Peltzer, Hailong Meng, Edel Aron, Noah Yann Lee, Cole G. Jensen, David Ladd, Mark Polster, Friederike Hanssen, Simon Heumos, nf-core community, Gur Yaari, Markus Christian Kowarik, , Steven H. Kleinstein
The paper introduces nf-core/airrflow, a Nextflow-based workflow for processing AIRR-seq data, validated on simulated and real datasets to analyze immune receptor repertoires.
PLoS Computational Biology · Jul 26, 2024Peer-reviewedBioinformatics