Author

Emili Toppari

Lawrence Berkeley National Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Synthetic Biology· 2

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Assay:metabolomics· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Christopher J. PetzoldiD· 2 shared Justin PanichiD· 2 shared Steven W. SingeriD· 2 shared Aidan E. CowaniD· 1 shared Bonnie L. FongiD· 1 shared David F. SavageiD· 1 shared Edward E. K. BaidooiD· 1 shared Eli J. DuganiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersSynthetic Biology

Christopher J. PetzoldORCID

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2 papers

Recent·Most cited

Feedstock-Efficient Conversion through Hydrogen and Formate-Driven Metabolism in Escherichia coli

Robert L. Bertrand, Justin Panich, Aidan E. Cowan, Jacob B. Roberts, Lesley J. Rodriguez, Juliana Artier, Emili Toppari, Edward E. K. Baidoo, Yan Chen, Christopher J. Petzold, Graham A. Hudson, Patrick M. Shih, Steven W. Singer, Jay D. Keasling

This paper engineers Escherichia coli to use hydrogen and formate as energy sources, improving mevalonate production by 57.6% through metabolic decoupling.

Metabolic Engineering · Oct 15, 2025Peer-reviewedSynthetic Biology

Functional plasticity of HCO3- uptake and CO2 fixation in Cupriavidus necator H16

Justin Panich, Emili Toppari, Sara Tejedor‐Sanz, Bonnie L. Fong, Eli J. Dugan, Yan Chen, Christopher J. Petzold, Zhiying Zhao, Yasuo Yoshikuni, David F. Savage, Steven W. Singer

This study investigates the functional plasticity of HCO3- uptake and CO2 fixation in C. necator H16 by testing endogenous and heterologous genes, showing that DIC transporters can support autotrophic growth and higher cell densities.

bioRxiv · May 7, 2024 · PreprintSynthetic Biology