Building pangenome graphs
Erik P. Garrison, Andrea Guarracino, Simon Heumos, Flavia Villani, Zhigui Bao, Lorenzo Tattini, Jörg Hagmann, Sebastian Vorbrugg, Santiago Marco‐Sola, Christian Kubica, David George Ashbrook, Kaisa Thorell, Rachel Rusholme‐Pilcher, Gianni Liti, Emilio Rudbeck, , Pjotr Prins
This paper introduces PGGB, a pipeline for building pangenome graphs that includes all variation without bias, enabling variation detection, conservation measurement, recombination event detection, and phylogenetic inference.
Nature Methods · Oct 21, 2024Peer-reviewedBioinformatics