Author

Emily So

University Health Network

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Benjamin Haibe‐KainsiD· 2 shared Anthony Mammoliti· 1 shared Bo WangiD· 1 shared Christoper Eeles· 1 shared Farnoosh Abbas AghababazadehiD· 1 shared Fengqing YuiD· 1 shared Housheng Hansen HeiD· 1 shared Ian C. P. SmithiD· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Benjamin Haibe‐KainsORCID

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2 papers

Recent·Most cited

Reusability Report: Few-shot learning creates predictive models of drug response that translate from high-throughput screens to individual patients

Emily So, Fengqing Yu, Bo Wang, Benjamin Haibe‐Kains

This paper reproduces and improves the reusability of the TCRP method for predicting drug response across preclinical and clinical datasets.

bioRxiv · Jul 6, 2023 · PreprintBioinformatics

Detection of circular RNAs and their potential as biomarkers predictive of drug response

Julia Nguyen, Anthony Mammoliti, Sisira Kadambat Nair, Emily So, Farnoosh Abbas Aghababazadeh, Christoper Eeles, Ian C. P. Smith, Petr Smirnov, Housheng Hansen He, Ming‐Sound Tsao, Benjamin Haibe‐Kains

The paper assesses the inter-lab consistency of circular RNA expression in cancer cell lines and identifies factors affecting reproducibility.

bioRxiv · Jan 8, 2023 · PreprintBioinformatics