Author

F. D. Orata

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:host-pathogen & immune response· 2 Organism:virus· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Assay:metagenomics· 1

Frequent Co-Authors

M. Alam· 3 shared M. T. Islam· 3 shared T. Nasreen· 3 shared Y. F. Boucher· 3 shared C. L. Tarr· 2 shared K. Y. H. Liang· 2 shared A. D. Millard· 1 shared A. Grigonyte· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersMicrobiology

M. Alam

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Lysogenized phages of methanotrophic bacteria show a broad and untapped genetic diversity

M. Stahn, A. Grigonyte, F. D. Orata, D. A. Collins, L. Rieder, M. G. Kalyuzhnaya, A. D. Millard, L. Y. Stein, D. Sauvageau

The paper identifies and characterizes novel phages from methanotrophic bacteria, revealing new phage families and species through genomic and structural analysis.

bioRxiv · May 20, 2022 · PreprintMicrobiology

Population analysis of Vibrio cholerae in aquatic reservoirs reveals a novel sister species (Vibrio paracholerae sp. nov.) with a history of association with human infections

M. T. Islam, T. Nasreen, P. Kirchberger, K. Y. H. Liang, F. D. Orata, F.-T. Johura, M. S. Im, C. L. Tarr, M. Alam, Y. F. Boucher

The paper identifies a novel Vibrio cholerae species, Vibrio paracholerae, in aquatic environments with potential human pathogenicity and links it to cholera outbreaks.

bioRxiv · May 5, 2021Microbiology

A Vibrio cholerae Core Genome Multilocus Sequence Typing Scheme to Facilitate the Epidemiological Study of Cholera

K. Y. H. Liang, F. D. Orata, M. T. Islam, T. Nasreen, M. Alam, C. L. Tarr, Y. F. Boucher

This paper introduces a cgMLST scheme for Vibrio cholerae, demonstrating its ability to identify outbreak-related strains and sublineages with higher resolution than existing methods.

Journal of Bacteriology · Nov 19, 2020Peer-reviewedMicrobiology

Simultaneous quantification of Vibrio metoecus and Vibrio cholerae with its O1 serogroup and toxigenic subpopulations in environmental reservoirs

T. Nasreen, N. A. S. Hussain, M. T. Islam, F. D. Orata, P. C. Kirchberger, M. Alam, S. K. Yanow, Y. F. Boucher

This paper develops a multiplex qPCR assay to quantify Vibrio metoecus and V. cholerae subpopulations in environmental samples, revealing seasonal and geographic differences in their abundance.

bioRxiv · Nov 1, 2019Microbiology