Author

F. Lammers

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:whole-genome sequencing· 4 Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:clustering· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1

Frequent Co-Authors

A. Janke· 4 shared M. A. Nilsson· 3 shared A. Goncalves· 1 shared A. Lonsdorf· 1 shared B. Berthet· 1 shared C. Reifenberg· 1 shared C. Rueckle· 1 shared C. Zimmer· 1 shared

Activity by Year

2016-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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4 shared papersEvolutionary Biology

A. Janke

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Author profile →

5 papers

Recent·Most cited

Regenerative cell turnover coupled to a tumor-hostile niche protects naked mole-rats from cancer

M. Behm, P. Baeza-Centurion, S. Weser, V. F. Busa, P. Zafferani, L. Penso-Dolfin, F. J. Botey, S. Delaunay, N. Hirschmuller, B. Berthet, M.-L. Koch, S. Del Prete, M. Bekavac, D. Sohn, L. Penteskoufi, , M. Frye

This study identifies a tumor-suppressive strategy in naked mole-rats that couples regenerative cell turnover with a tumor-hostile stromal niche to prevent cancer.

bioRxiv · Oct 10, 2023 · PreprintCancer Biology

Improving the chromosome-level genome assembly of the Siamese fighting fish (Betta splendens) in a university Master's course.

S. Prost, M. Petersen, M. Grethlein, S. J. Hahn, N. Kuschik-Maczollek, M. E. Olesiuk, J.-O. Reschke, T. E. Schmey, C. Zimmer, D. K. Gupta, T. Schell, R. Coimbra, J. De Raad, F. Lammers, S. Winter, A. Janke

The paper improves the chromosome-level genome assembly of the Siamese fighting fish using long-read nanopore sequencing and HiC scaffolding, demonstrating educational application in a Master's course.

bioRxiv · Mar 6, 2020Evolutionary Biology

Phylogenetic Conflict In Bears Identified By Automated Discovery Of Transposable Element Insertions In Low Coverage Genomes

F. Lammers, S. Gallus, A. Janke, M. A. Nilsson

The paper develops a pipeline called TeddyPi to detect transposable element insertions in bear genomes, revealing phylogenetic conflicts and enabling accurate species tree reconstruction.

bioRxiv · Apr 4, 2017Evolutionary Biology

Screening for the ancient polar bear mitochondrial genome reveals low integration of mitochondrial pseudogenes (numts) in bears

F. Lammers, A. Janke, C. Rueckle, V. Zizka, M. A. Nilsson

The paper screens the polar bear genome for mitochondrial pseudogenes (numts) and finds only 13 integrations, suggesting a low integration rate and loss of the original polar bear mitochondrial genome.

bioRxiv · Dec 16, 2016Evolutionary Biology

The evolutionary history of bears is shaped by gene flow across species

V. Kumar, F. Lammers, T. Bidon, M. Pfenninger, L. Kolter, M. A. Nilsson, A. Janke

This study analyzes bear genomes to show that gene flow across species is common and not limited to closely related species, challenging traditional speciation models.

bioRxiv · Nov 29, 2016Evolutionary Biology