Author

F. Pedrosa-Silva

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 4 Microbiology· 2

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Organism:plant (other)· 4 Approach:statistical model· 4 Assay:bulk RNA-seq· 3 Organism:bacteria (other)· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

T. M. Venancio· 6 shared F. Almeida-Silva· 3 shared F. L. Olivares· 3 shared F. P. Matteoli· 2 shared K. C. Moharana· 2 shared R. K. Gazara· 2 shared A. F. Alves· 1 shared B. E. B. Cyriaco· 1 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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6 shared papersPlant Biology

T. M. Venancio

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6 papers

Recent·Most cited

Comparative metagenomic profiling of seed-borne microbiomes in a landrace and a hybrid maize variety

S. Henaut-Jacobs, B. E. B. Cyriaco, F. Pedrosa-Silva, F. L. Olivares, T. M. Venancio

This study compares seed-borne microbiomes of a landrace and hybrid maize variety, finding greater diversity in the landrace and distinct functional gene profiles.

bioRxiv · Apr 4, 2024Plant Biology

The Soybean Expression Atlas v2: a comprehensive database of over 5000 RNA-seq samples

F. Almeida-Silva, F. Pedrosa-Silva, T. M. Venancio

The Soybean Expression Atlas v2 expands its dataset to 5481 RNA-seq samples, offering improved tools for gene expression analysis and visualization.

The Plant Journal · Sep 8, 2023Peer-reviewedPlant Biology

Genome sequencing of the vermicompost strain Stenotrophomonas maltophilia UENF-4GII and population structure analysis of the S. maltophilia Sm3 genogroup

F. Pedrosa-Silva, F. P. Matteoli, H. Passarelli-Araujo, F. L. Olivares, T. M. Venancio

The paper sequences the genome of S. maltophilia UENF-4GII and analyzes Smc genomes to identify genes associated with resistance, virulence, and population structure.

bioRxiv · Aug 12, 2021Microbiology

Integrating omics approaches to discover and prioritize candidate genes involved in oil biosynthesis in soybean

D. K. Turquetti-Moraes, K. C. Moharana, F. Almeida-Silva, F. Pedrosa-Silva, T. M. Venancio

The paper integrates omics data to identify candidate genes involved in oil biosynthesis in soybean, highlighting key genes and transcription factors, and suggests breeding priorities.

bioRxiv · Aug 5, 2021Plant Biology

Characterization of cellular, biochemical and genomic features of the diazotrophic plant growth-promoting bacterium Azospirillum sp. UENF-412522, a novel member of the Azospirillum genus

G. L. Rodrigues, F. P. Matteoli, R. K. Gazara, P. S. L. Rodrigues, S. T. dos Santos, A. F. Alves, F. Pedrosa-Silva, I. Oliveira-Pinheiro, D. Canedo-Alvarenga, F. L. Olivares, T. M. Venancio

This paper characterizes the genomic and biochemical features of Azospirillum sp. UENF-412522, identifying genes related to nitrogen fixation, phosphate solubilization, and plant growth promotion.

bioRxiv · May 6, 2021Microbiology

Systematic analysis of 1,298 RNA-Seq samples and construction of a comprehensive soybean (Glycine max) expression atlas

F. B. Machado, K. C. Moharana, F. Almeida-Silva, R. K. Gazara, F. Pedrosa-Silva, F. S. Coelho, C. Grativol, T. M. Venancio

The paper systematically analyzes 1,298 soybean RNA-seq samples to construct a comprehensive expression atlas, identifying housekeeping genes and novel splicing isoforms.

bioRxiv · Dec 23, 2019Plant Biology