Transcriptome-based cell type assignment for kidney cell culture models
Mona Schoberth, Samuel Böhm, Oleg Borisov, Yong Li, Gabriele Greve, Bayram Edemir, Owen M. Woodward, Hyun Jun Jung, Frank Hutter, Lukas Westermann, Anna Köttgen, Pascal Schlosser, Michael Köttgen, Stefan Haug
The paper develops a transcriptome-based method to match bulk RNA-seq data from kidney cell lines to single-cell reference datasets, identifying accurate cell type identities and evaluating method performance.
bioRxiv · Apr 1, 2026 · PreprintBioinformatics